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Name : Tola_2404 (Tola_2404) Accession : YP_002893587.1 Strain : Tolumonas auensis DSM 9187 Genome accession: NC_012691 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2630003 - 2632012 bp Length : 2010 bp Strand : + Note : KEGG: xca:xccb100_2412 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA to DNA sequence : ATGCGGCTATTTCTCTGCGAAAAACCTTCGCAAGGCAAGGACATCGGGCGCCTGTTGGGCGCAAGGCAGCGCGGCAATGG TTGCCTCAACGGCCCCGGCGTCGTCGTGACGTGGTGCATTGGCCACCTTGTCGAAGCCGCGCCGCCGGAAGCCTATGACG AACAGCTCAAGCGCTGGACGATCGAGCAACTTCCCATTATTCCCCAGCACTGGCGGGTTGAGGTCAAACCCAAGACCGCA GCGCAATTCAAGGTCGTCAAAGACCTTCTGAGCAAGGCGACCGAACTGGTCATCGCCACCGACGCCGATCGCGAAGGCGA ACTGATTGCGCGCGAGATCATCGATCTCTGTGGCTATCGCGGCCCCATTCAACGGCTGTGGTTGTCAGCACTGAACGACG CCTCGATCCATGCCGCGCTCGGCAAGCTGAAGCCTTCGGGCGACACGCTGCCCATGTATCACTCGGCGCTGGCGCGCTCC AGAGCGGACTGGCTGGTGGGGATGAACCTGAGCCGCCTGTTCACCCTCCTGGGGCGCCGGGCCGGCTATGACGGCGTGCT GTCGGTCGGACGCGTGCAGACCCCCACGCTCAGACTGGTGGTCGATCGCGATCGTGAAATCGCGGCCTTCGTCTCCGTCC CGTTCTGGTCCATCGAAGTGGCGCTGTCCTGCACAGGCCAGACATTCACCGCGCAGTGGCTGCCGCCATCGGCCAGTACC GACGATGCAGGCCGTTGCCTGCAGGAGCCTGTTGCGCAGCAGGCGGTGCAGCGCATCCGCGCCGCTGGCGCTGCTCAGAT GGTATCGGTCGAGACCGAACGCATGCGCGAAGGCGCGCCATTGCCGTTTGATCTCGGCACCTTGCAGGAAGTGTGTTCCA AGCAGTTCGGCCTCGATGTCCAGGAGACGCTAGAGATCGCCCAATCCCTGTACGAGACGCACAAGGCCACCACCTATCCA CGTAGCGACTCCGGCTATCTTCCCGAAAGCATGCATGCCGAAGCGCCCACGGTGCTCGACAGTCTGCTCAAGACCGATCC GAGCCTGCGCCCGATCATCGACCAGCTCGACCGCACCCAGCACTCGCGCGCCTGGAACGACGCCAAGGTATCGGCCCACC ACGGCATCATCCCCACGCTCGAACCCGCCAACCTGTCGGCGATGAGCGAGAAGGAACTGGCCGCCTACCGCCTGATCCGC GCCCACTACCTGGCGCAATTTCTTCCGCCGCACGAGTTCGACCGCACGACAGCAAGGTTCTCTTGCGGCGACCAGACATT GCAGGCCGTGGGCAAGCACGTAGTCGTGCCGGGTTGGCGCCTGGTACTGGCCGAGCCGCAACCCGACGATGCCGGCGATG ACGCCGCACCCCGCAGCCAGGTGCTGCCAGCGCTACACCAAGGGCTGGCGTGCCAGGTGGCTGGGGTCGATCTGAAGGCG CTCAAGACGCTGCCGCCGCGCCCGTACACCCAAGGTGAGTTGGTCAAGGCGATGAAAAGCGTCGCCAAACTGGTGTCAGA CCCACGCCTGAAACAGAAGCTGAAAGATTCCGTGGGCATCGGCACCGAAGCGACCCGCGCCAATATCATCGGCGGCCTGC TGAACCGTGGCTACCTGATCAAGAAAGGACGGGCCATCCGCGCCTCGGATGCCGCCTTCACGCTCATCGACACCGTGCCC GCCGCGATCGCCGATCCCGGCACAACCGCGGTGTGGGAACAGGCGCTCGACATGATCGAAACCGGACAGCTCGCGCTCGA TACCTTCATCGACAAGCAGGCGGCCTGGGTCACGCAGTTGATTGCGCAGTACCGTGGCACCTCGCTGTCCATCAAGATTC CCGAGGGGCCAGCATGCCCGCAGTGTGGCGGTGCCACGCGCCAGCGCAGCGGCAAGAGCGGTCCATTCTGGTCCTGCGCG AAATACCCCGACTGCAAGGGAACGCTGCCCATCGAATCGGGCAAGCGTGCCGCGCCGCGCAAGCGCCGCGGTGGCCCGAA GGCCTCCTGA Protein sequence : MRLFLCEKPSQGKDIGRLLGARQRGNGCLNGPGVVVTWCIGHLVEAAPPEAYDEQLKRWTIEQLPIIPQHWRVEVKPKTA AQFKVVKDLLSKATELVIATDADREGELIAREIIDLCGYRGPIQRLWLSALNDASIHAALGKLKPSGDTLPMYHSALARS RADWLVGMNLSRLFTLLGRRAGYDGVLSVGRVQTPTLRLVVDRDREIAAFVSVPFWSIEVALSCTGQTFTAQWLPPSAST DDAGRCLQEPVAQQAVQRIRAAGAAQMVSVETERMREGAPLPFDLGTLQEVCSKQFGLDVQETLEIAQSLYETHKATTYP RSDSGYLPESMHAEAPTVLDSLLKTDPSLRPIIDQLDRTQHSRAWNDAKVSAHHGIIPTLEPANLSAMSEKELAAYRLIR AHYLAQFLPPHEFDRTTARFSCGDQTLQAVGKHVVVPGWRLVLAEPQPDDAGDDAAPRSQVLPALHQGLACQVAGVDLKA LKTLPPRPYTQGELVKAMKSVAKLVSDPRLKQKLKDSVGIGTEATRANIIGGLLNRGYLIKKGRAIRASDAAFTLIDTVP AAIADPGTTAVWEQALDMIETGQLALDTFIDKQAAWVTQLIAQYRGTSLSIKIPEGPACPQCGGATRQRSGKSGPFWSCA KYPDCKGTLPIESGKRAAPRKRRGGPKAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 84 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 76 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 65 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 5e-167 | 51 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 7e-167 | 51 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 7e-167 | 51 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 8e-161 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-155 | 49 |
