Gene Information

Name : Tola_2265 (Tola_2265)
Accession : YP_002893449.1
Strain : Tolumonas auensis DSM 9187
Genome accession: NC_012691
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2484079 - 2485326 bp
Length : 1248 bp
Strand : +
Note : PFAM: integrase family protein; KEGG: she:Shewmr4_2777 phage integrase family protein

DNA sequence :
ATGAGTAAAGACAAATTAACCGACTCCAAGCTGCGAACAGCAAAGCCGGAAGACAAAGAATACAACCTCGGTGATGGGGA
TGGTCTGTATCTAAGGATCAAGCCCAACGGTAACAAAATGTGGTTATTCAACTACTACCGTCCAGACAATAAAAAAAGAG
CTAATTTAAGTTTTGGCCCCTACCCTGATGTTACTTTGGCGGCTGCCAGAGAGCGGCGTAGGCAAGCACGTGCGTTGTTA
TCTGAAAACATTGACCCACAAACCTACTTGCAAGAACAAATCGCAATTACCAAAGCCAGAGATGAGGCAAGTAGTAACAC
GTTCGTTAAGATTGCTAGGCAATGGCTGGATATGAAGCGCCATGATGTTTCTGAAGACTATGCAGAAGACACATGGCGTT
CACTCGAAATGTATATCCTTCCAGAGCTAGCGAACAAAACCATAGATCTCATCCGTGCCCCGATGGTTATTTCTCTACTG
CGACCGTTAGAAGCCGATGGCAAGCTGGAAACAGTCCGTAGGCTTTGCCAGCGTGTAAATGAAATTATGTCTTATGCCGT
TAATCACGGGCTTCTCGATGCAAACCCTTGCGCTGATATTCGAAAAGTATTCAAGAAACCATCTAAAAAACACATGCCAA
CAATCAGACCCGATGAATTACCGCTTCTGATGGCAGACATTATCAATGGTCGTTTAGATGCCACCACCCGCTGCCAGATT
GAATGGAGTCTTCATACCCTAGTCCGACCGAACGAGTCAGCCGGTACGCGATGGGATGAGATCGACTTAGAATCTAAGAT
ATGGACTATTCCGGCAGAACGGATGAAGATGGATCGAACGCACCGGATTCCATTAACAAAACAAGCCATTGCCCTGCTTG
AAAGAATGAAACCAATCAGTGGTCATCGACCCCATGTATTTCCCAGTTATCGTAATCCACTTGGTCATATTCATGAACAA
ACTGCAAATGCAGCATTGAAACGCCTTGGCTATGGCGGTCGACTGGTCGCTCATGGTCTGCGCTCTCTTGGAAGCACAAC
GCTAAACGAGCAGGAATTTAACCCTGATGTTATTGAGGCTGCGCTGTCTCATGCAGATGATAATGAGATCCGTCGGGCCT
ACAACCGAAGTGATTACTTTGAACAACGCATAAAAATGATGCAATGGTGGAGTGATCATATCGAGGCTGCGGCCCAAGGA
TGGTTCAGTCTGGGTGGCAGTAAGGGATTAAAAATAGTAAATAGTTAG

Protein sequence :
MSKDKLTDSKLRTAKPEDKEYNLGDGDGLYLRIKPNGNKMWLFNYYRPDNKKRANLSFGPYPDVTLAAARERRRQARALL
SENIDPQTYLQEQIAITKARDEASSNTFVKIARQWLDMKRHDVSEDYAEDTWRSLEMYILPELANKTIDLIRAPMVISLL
RPLEADGKLETVRRLCQRVNEIMSYAVNHGLLDANPCADIRKVFKKPSKKHMPTIRPDELPLLMADIINGRLDATTRCQI
EWSLHTLVRPNESAGTRWDEIDLESKIWTIPAERMKMDRTHRIPLTKQAIALLERMKPISGHRPHVFPSYRNPLGHIHEQ
TANAALKRLGYGGRLVAHGLRSLGSTTLNEQEFNPDVIEAALSHADDNEIRRAYNRSDYFEQRIKMMQWWSDHIEAAAQG
WFSLGGSKGLKIVNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAK20773.1 integrase Not tested VPI Protein 4e-111 56
int AAK20803.1 integrase Not tested VPI Protein 4e-111 56
unnamed AAA82714.1 integrase Not tested VPI Protein 4e-111 56
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 5e-111 56
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 5e-111 56
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 6e-101 54
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 7e-93 50
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 3e-93 50
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 3e-93 50
int AAD44730.1 Int Not tested SHI-2 Protein 2e-54 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tola_2265 YP_002893449.1 integrase family protein VFG1092 Protein 1e-93 50