|
Name : araD (Tola_2161) Accession : YP_002893346.1 Strain : Tolumonas auensis DSM 9187 Genome accession: NC_012691 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : - Position : 2366146 - 2366844 bp Length : 699 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGAGCCTGCAACAACTGAAGCAACAGGTACTGGAGGCCAATCTCGACCTGCCCCGTTACGACCTGGTGACCTTCACCTG GGGCAATGTCAGTGGTATCGATCGCGACCGAGGACTGGTCGTGATCAAACCCAGTGGCGTCAGCTACGACAAGATGCGGA TCAATGATCTGGTGGTGCTGGATCTCAATGGCAACCGTGTTGAAGGCGACCTGCGTCCATCATCCGACACGCCAACCCAT CTGGTGATGTACCGCCGTTACCCGGAACTGGGTGGTGTGGTACATACCCACTCCACGCATGCCACCGCCTGGGCTCAGGC ACGCCGTGCGATCCCGATCCAGGGCACCACGCAGGCCGATTACTTCCACGGTAACGTCCCCTGCACCCGTTTGTTATCTG AATCAGAAGTCAGCGAAGACTATGAAGGTCTGACCGGACATCTGATCGTCGAAACGCTGCACGATACACCGCCACTGACC ATGCCCGGCATTCTGGTTGCCAATCATGGTCCGTTCAGCTGGGGCAAAGATCCCCATGACGCAGTACACAACGCAGTGGT GCTGGAAGAAGTAGCCCGGATGTCCTGGATCACACATCAGCTCAATCCGCAGGCTCCTGCACTGCCCGATTACATGCTGG AAAAACATTACCAGCGCAAACATGGCAAAAACGCTTATTACGGTCAAAACACCAAATAA Protein sequence : MSLQQLKQQVLEANLDLPRYDLVTFTWGNVSGIDRDRGLVVIKPSGVSYDKMRINDLVVLDLNGNRVEGDLRPSSDTPTH LVMYRRYPELGGVVHTHSTHATAWAQARRAIPIQGTTQADYFHGNVPCTRLLSESEVSEDYEGLTGHLIVETLHDTPPLT MPGILVANHGPFSWGKDPHDAVHNAVVLEEVARMSWITHQLNPQAPALPDYMLEKHYQRKHGKNAYYGQNTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 2e-60 | 56 |
