Gene Information

Name : Tola_0200 (Tola_0200)
Accession : YP_002891416.1
Strain : Tolumonas auensis DSM 9187
Genome accession: NC_012691
Putative virulence/resistance : Virulence
Product : Fis family sigma-54 specific transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3604
EC number : -
Position : 221430 - 222434 bp
Length : 1005 bp
Strand : +
Note : PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pmy:Pmen_0098 fis family transcriptional regulator

DNA sequence : 
ATGACAATTACAAATAATAAAGCCGCTCAGCGGCAAGAGCCGGATAACCCATACGCTTTAATTGGGAGCAGTCAGTTGAT
GAAACAGGTTTATCGCCTGATTTCCAAGGTGCTTCATAGTGAAGCCAACATCCTTTTAACTGGTGAAACAGGCACCGGAA
AGGAGTTGGTGGCTCGCGCTATTCATGAATATGGTCACCGACGTACACAGCCTTTTGTTGTACAGAACTGCGCCAGCTTG
CCTGACGGGCTATTGGAAAGTGAACTGTTTGGTTATAAAAAAGGGGCATTTACAGGTGCCGATCGCAATCACCTAGGAAT
GTTTGATGCTGCTCATAACGGCATCCTGTTTCTGGATGAAATCGGTGATCTGCCGTTAATACTGCAAGCGAAATTGTTGC
GGGTGTTACAGGAGCAGGAAATTCGTCCACTGGGTGATACGCAGTATCACAAAATCAATGTCCGGGTGATTGCCGCAACG
CATCGGAATCTGGAGGAGATGGTTGCACTGGGGGAGTTCCGCAGCGATCTCTATTACCGGTTAGCTCATTTTCCTATTGA
GTTACCGCCGTTGCGGGAACGGGAAGGTGACATAAAGAAATTAGCCTATTCATTTCTCCGTGAGATTGCCATGCGTGAAC
GTCGTGGAGAAATGAGGTTGTCAGCCGCTGCTGAAAAAGCATTGCAGAATTATGACTTCCCGGGAAATGTCCGCGAGCTG
AAAAGTATGATTGAGCGAGCGATTTTGCTGGCTGATGATACCGATACCATTGAATGTCATCATTTCCCTAATATTCAGGG
CGTTATATCACCGGAATCATCACCTGTACACGGTGGCATGCTGAAAGAACTGGTCGATCATTATGAGCGGCAGGTGTTGA
TTGAAAGCCTGAAAAAACATCATGGTAATCAGAAAAATACGGCTATTGCACTCGGTGTTGCCCGCCGGACACTGCTCTAC
AAACTCAGTAAACATAACATTAATTCCCGGAACTGGAGGGCATGA

Protein sequence : 
MTITNNKAAQRQEPDNPYALIGSSQLMKQVYRLISKVLHSEANILLTGETGTGKELVARAIHEYGHRRTQPFVVQNCASL
PDGLLESELFGYKKGAFTGADRNHLGMFDAAHNGILFLDEIGDLPLILQAKLLRVLQEQEIRPLGDTQYHKINVRVIAAT
HRNLEEMVALGEFRSDLYYRLAHFPIELPPLREREGDIKKLAYSFLREIAMRERRGEMRLSAAAEKALQNYDFPGNVREL
KSMIERAILLADDTDTIECHHFPNIQGVISPESSPVHGGMLKELVDHYERQVLIESLKKHHGNQKNTAIALGVARRTLLY
KLSKHNINSRNWRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS AAT96161.1 HrpS Virulence T-PAI Protein 2e-42 41
hrpS AAT96215.1 HrpS Virulence T-PAI Protein 2e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tola_0200 YP_002891416.1 Fis family sigma-54 specific transcriptional regulator BAC0467 Protein 2e-58 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tola_0200 YP_002891416.1 Fis family sigma-54 specific transcriptional regulator VFG1214 Protein 1e-55 41