Gene Information

Name : rdgC (Tola_2072)
Accession : YP_002893257.1
Strain : Tolumonas auensis DSM 9187
Genome accession: NC_012691
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 2265191 - 2266099 bp
Length : 909 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAAAACCTGCAACTGTACCGCTTTACTCGTCCGTTTGAACACGATGCTGACAGCCTGGAAAAAATGCTGCA
GAGCCATCTGTTTTCGCCCTGTGGCAGTCAGGAGATGAGCAAATTCGGTTGGATTTCCCCGCTGGGAAAACATGCCGAAG
TATTGGTGCATGAAGCACAGGGACAGATGTTGTTATGTGCTAAAAAAGAAGAAAAAGTGCTGCCGGCAGCCGTCATCAAA
GACATGCTGCAGGAAAAAATCGATGAGATGGAAGCCGCTCAGGGCCGTGCACTGAAGAAGAAAGAGAAAGAATCGCTGAA
AGAAGAGATCCTGCACACGCTGCTGCCTCGTGCCTTCCCGCGTTCCAGCCAGACGTTCTTATGGATCAATCCGGCAGAAA
ACTATCTGGTCGTCGATGCAGGTTCAGCGAAAAAAGCCGACGACGTATTATCTTTGTTGCGTAAATGTACCGGTAGTCTG
CCAGTTGTACCGTTTGCACTGCAGAATCCACCAGAAATTACCATGACTGAATGGTTAAATGCGGGAGCTGCGCCGGGTGG
TTTCGTATTGGAAGATGAAGCCGAGCTGCGTTCTGCGCTGGAGCATGGCGGCATCATCCGCTGTAAAGAGCAGGATCTGG
TCACTGAAGAGATCAAAGCGCATTTGCTGGCCGATAAAATGGTCACCAAACTGGCTCTGAACTGGTCTGATACCGTTAGT
TTCGTTTTAGCTGATGATTTATCGATCAAACGCCTGAAATTCAGCGAAGAATTACGCGAACAGAATGAAGATGTGATTTC
TGAAGACCATGTTGCCCGCATGGATGCCGACTTTGCGCTGATGACCGGCGAACTGGCAAAATTCGTTCCTGAGCTGGTTG
CTGCGCTCGGCGGAGAAAAAGCGGAATAA

Protein sequence :
MWFKNLQLYRFTRPFEHDADSLEKMLQSHLFSPCGSQEMSKFGWISPLGKHAEVLVHEAQGQMLLCAKKEEKVLPAAVIK
DMLQEKIDEMEAAQGRALKKKEKESLKEEILHTLLPRAFPRSSQTFLWINPAENYLVVDAGSAKKADDVLSLLRKCTGSL
PVVPFALQNPPEITMTEWLNAGAAPGGFVLEDEAELRSALEHGGIIRCKEQDLVTEEIKAHLLADKMVTKLALNWSDTVS
FVLADDLSIKRLKFSEELREQNEDVISEDHVARMDADFALMTGELAKFVPELVAALGGEKAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 2e-69 51