Gene Information

Name : Tola_0194 (Tola_0194)
Accession : YP_002891410.1
Strain : Tolumonas auensis DSM 9187
Genome accession: NC_012691
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 213691 - 214185 bp
Length : 495 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: pmy:Pmen_0090 hypothetical protein

DNA sequence : 
ATGTCGGGAAAAGAAGGCTCTGTTGCACCGAAAGAGCGGATTAATGTCACCTTCAAACCATCTACTGGTGAAGGGATGGA
AGAGCTTGAGTTGCCACTTAAGTTAATGATGATTGGTGATTACACTCTGACAAAAGATGATCGCAAACTTGAAGATCGTA
AAGCCATTAATATCAATAAGAACAATTTCAATGAGGTACTGGAAAATCAGAATATTGGTTTAGATCTGCAAGTTCCGAAT
CGTCTGAGTAACCATGATGTGAATGAAGAAATAGCACTTAGTTTGCGTTTCAAAACATTAAAAGATTTTGACCCGGCGAA
TCTGGTACAGCAAGTACCAGAAATGAAAGCTCTAATGGAACTCCGTGATGCCTTAGTTGCACTGAAAGGGCCGTTAGGCA
ACGTACCATCTTTCCGTAAAGCAATTGAAGAAGTTTTGACCAACCAGGATGCCAGAGAAAAAGTGTTGGCTGAGTTGGGA
ATGGTTGAAAAATAA

Protein sequence : 
MSGKEGSVAPKERINVTFKPSTGEGMEELELPLKLMMIGDYTLTKDDRKLEDRKAININKNNFNEVLENQNIGLDLQVPN
RLSNHDVNEEIALSLRFKTLKDFDPANLVQQVPEMKALMELRDALVALKGPLGNVPSFRKAIEEVLTNQDAREKVLAELG
MVEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-26 46
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-25 43
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 2e-25 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tola_0194 YP_002891410.1 type VI secretion protein VFG2092 Protein 2e-32 47
Tola_0194 YP_002891410.1 type VI secretion protein VFG2474 Protein 3e-31 43