Gene Information

Name : Tola_1060 (Tola_1060)
Accession : YP_002892273.1
Strain : Tolumonas auensis DSM 9187
Genome accession: NC_012691
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1154853 - 1155665 bp
Length : 813 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: vsp:VS_1873 transposase (orfB) of insertion sequence ISVisp1 ; IS3 family subgroup IS3

DNA sequence :
GTGAAACGTCTTTGCCAACGACTTGGCGTTTCACGTAGTGGCTATTATGACTGGCTAAAGCGCACTCCCAGTGTTCATGT
GCAACAGGATGCTGTGTTACTGACGCACATTAAGCGTGTCTTCAAGGCATCGGCGGAACGATACGGCAGTCCTAAAGTTT
ATCAGGCACTTCGGACTCAAGGTGTTGTCGTTAGTCAGAAACGAGTGGCCAGATTGATGCGAGAAAATGGCTTAAAAGCT
CGCGTTGAGCGTGTTTATAAACGATTGAGTAAGATGCGGGCTGAATTAAAAGTGCTGCCAAATCATCGCTTGCAGGCGCC
CAAGCCAACAGGACCAAATCAACAGTGGTCTAGCGATGTCACCTATATCCGACATGGTCACAGGCATGTCTTCCTCGCGG
TCATTGTTGACCTCTGGTCGCGGAAAATTATTGGCTGGGCGCTCCATGAGAAACTCAATGCTGAATTATCTGTTGCTGCT
TTATATCAAGCATTGAAACAACGGAAACCAAAACCGGGTCTCATCCTACATACAGATCGTGGCGTTGAGTTCAGAGCACA
AGCCATGCAAATCTGGCTCAATAAATTTGGGATCCGACATAGTATGAACCGGCCAGGTCAGTGCACCGATAACGCTGAAG
TTGAATCGTTTTTTAAGACGTTAAAGTCTGAACTGATTTACGAAAATTATTTTCCGACGGTATCTGCACTGAGAGATCAG
ATCAGCAGATACATCCGGAATTTTTATAATAAGGTGCGGCTGCACAGTAGCCTCAATTATGTATCTCCGATACAGTTTGA
ACATGCCGCTTAA

Protein sequence :
MKRLCQRLGVSRSGYYDWLKRTPSVHVQQDAVLLTHIKRVFKASAERYGSPKVYQALRTQGVVVSQKRVARLMRENGLKA
RVERVYKRLSKMRAELKVLPNHRLQAPKPTGPNQQWSSDVTYIRHGHRHVFLAVIVDLWSRKIIGWALHEKLNAELSVAA
LYQALKQRKPKPGLILHTDRGVEFRAQAMQIWLNKFGIRHSMNRPGQCTDNAEVESFFKTLKSELIYENYFPTVSALRDQ
ISRYIRNFYNKVRLHSSLNYVSPIQFEHAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-42 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-42 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-42 41