Gene Information

Name : Tola_0972 (Tola_0972)
Accession : YP_002892186.1
Strain : Tolumonas auensis DSM 9187
Genome accession: NC_012691
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1053265 - 1054158 bp
Length : 894 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aha:AHA_3273 tyrosine recombinase XerD

DNA sequence :
ATGAAACAAGATAACCCGCTGATAGAACAATTTCTGGATATGCTCTGGCTGGATCGCGGACTCTCGGATAATACCATTTC
TTCTTACCGCACCGATCTGTATAAGCTGAATGACTGGCTGGATAGCAAAGCGTCCTCTTATCTGACTCTGGATACTTTGC
TGCTGCACGCCTATCTGGCCTGGCGTATCGATCAGGGTTTTAAAGCCACGTCAACCGCCCGTCTACTCAGTGCGTTGCGC
CGCTTCTATCAATTTCTGATCCGTGAACAGCTCCGGGCTGATGATCCGACGGTTGCGCTGGATAGTCCGAAATTACCGCT
GCGTTTGCCGAAAGACATCAGTGAAGAGCAGGTGGAAGCATTACTGGCTGAGCCGGATGTGCAGGATCCTATCGAACTGC
GTGATAAAGCCATGCTGGAGCTTTTATATGCCACCGGTCTGCGTGTCTCAGAGCTTGTCGGTTTGCAGATGCATCAGCTG
GCATCGAATATGGCGTATGTGCGGGTAACCGGGAAAGGCAATAAAGACCGTCTGGTACCGACCGGCGAAGAGGCTCAATA
CTGGATACAGCGTTTCATGCGGGAAGGGCGGATGACGTTACTGCATGAACAGGCGTCGGATGTGTTATTTCCATCCAACC
GTTCACAGCAGATGACGCGGCAGACGTTCTGGCATCGTATTAAGTTGTATGCCGTACGAGCCAACATTACCTCTGATCTG
TCACCACATACCCTCAGGCATGCTTTTGCCACACATTTACTGAATCATGGCGCGGACTTACGTGTCGTGCAGATGTTGCT
CGGGCACTCAGATTTATCGACCACACAGATTTATACTCATGTCGCTCAGGCGCGTTTGCAGGAGTTGCATCAGGAACATC
ATCCGCGCGCATAG

Protein sequence :
MKQDNPLIEQFLDMLWLDRGLSDNTISSYRTDLYKLNDWLDSKASSYLTLDTLLLHAYLAWRIDQGFKATSTARLLSALR
RFYQFLIREQLRADDPTVALDSPKLPLRLPKDISEEQVEALLAEPDVQDPIELRDKAMLELLYATGLRVSELVGLQMHQL
ASNMAYVRVTGKGNKDRLVPTGEEAQYWIQRFMREGRMTLLHEQASDVLFPSNRSQQMTRQTFWHRIKLYAVRANITSDL
SPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQARLQELHQEHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-63 59
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-63 59