Gene Information

Name : atoC (CTB_4701)
Accession : YP_002888972.1
Strain : Chlamydia trachomatis B/TZ1A828/OT
Genome accession: NC_012687
Putative virulence/resistance : Virulence
Product : two component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 545177 - 546337 bp
Length : 1161 bp
Strand : +
Note : -

DNA sequence :
ATGTCGATAGAACACATTCTTATTATTGACGATGATCCCCATATCCTGGCTCTTCTTTCTGAGATACTGGGCGCTCGGAA
CTTTTCAGTGTCTTCTGCTCCAGGAGTCAAACAAGCTATTAAGCAGATCTCTAACTGTCCTTTCGATCTGATTATTTCCG
ATATGAATATGCCTGATGGTTCAGGATTGGATATTATCCAGTATACAAAACAGCATCGTCCGCAAACCCCTATCTTGGTC
ATTACTGCTTTCGGAACTATTCAAAATGCTGTTGAAGCTATGCGATCCGGAGCTTTTAACTATCTGACCAAACCGTTTTC
CCCCGATGCCCTTTTTACTTTAATCGCTAAAGCCGAAGAACTCCAAGCGCTACAACAAGACAACCTATTTCTACAATCAC
AAGGATCCTCCATCTCACATCCTCTGATCGCCGAAAGTCCTTCCATGAAACAGCTACTTGATAAAGCTCGCCGAGCGGCT
AACAGTTCTGCGAATATATTCGTACACGGAGAATCCGGATGCGGAAAAGAAAATCTTTCATTTTTTATCCACAAGCACTC
CCCTCGATCTACTAAGCCCTATATTAAAGTCAATTGTGCTGCTATCCCCGATACTTTGTTAGAATCTGAGTTTTTCGGGC
ACGAAAAAGGAGCTTTCACAGGAGCAACCACGAAGAAAGTAGGAAGATTTGAACTCGCCCACCAAGGCACTCTTTTACTA
GATGAAATCACAGAAATTCCGATCCATTTGCAAGCCAAACTTTTGCGGGCAATACAAGAACAAGAATTCGAACATATTGG
AGGAACAAAAACCCTCCCTGTAAACATTCGATTTCTAGGCACTTCCAATCGTGACCTTGAGGAAGCTATTGAAACCAAAG
TTCTCCGTCAAGATCTCTACTATCGATTGAGTGTGATCTCTTTACACATCCCTCCCCTTCGCGATAGAAAAGAAGATATC
CTCCCTTTAGCTCATTACTACTTAGAAAAATTTTGTAAGATGAATAATAAGCCTCCAAAAACATTGTCTTTAGAAGCGCA
AAGAAATCTTTTGGATTATTCATGGCCTGGGAATGTTCGAGAACTCTCTAACGTACTCGAACGAACTGTTATTCTAGAAA
ACGATCCTGCGATCACTCCTTCTATGCTCGCTCTCTTATAA

Protein sequence :
MSIEHILIIDDDPHILALLSEILGARNFSVSSAPGVKQAIKQISNCPFDLIISDMNMPDGSGLDIIQYTKQHRPQTPILV
ITAFGTIQNAVEAMRSGAFNYLTKPFSPDALFTLIAKAEELQALQQDNLFLQSQGSSISHPLIAESPSMKQLLDKARRAA
NSSANIFVHGESGCGKENLSFFIHKHSPRSTKPYIKVNCAAIPDTLLESEFFGHEKGAFTGATTKKVGRFELAHQGTLLL
DEITEIPIHLQAKLLRAIQEQEFEHIGGTKTLPVNIRFLGTSNRDLEEAIETKVLRQDLYYRLSVISLHIPPLRDRKEDI
LPLAHYYLEKFCKMNNKPPKTLSLEAQRNLLDYSWPGNVRELSNVLERTVILENDPAITPSMLALL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-62 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
atoC YP_002888972.1 two component system response regulator VFG1249 Protein 9e-75 45
atoC YP_002888972.1 two component system response regulator VFG1214 Protein 2e-75 44
atoC YP_002888972.1 two component system response regulator VFG0116 Protein 2e-66 42