Gene Information

Name : EAT1b_0452 (EAT1b_0452)
Accession : YP_002884829.1
Strain : Exiguobacterium sp. AT1b
Genome accession: NC_012673
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 413889 - 414776 bp
Length : 888 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bcy:Bcer98_2788 site-specific tyrosine recombinase XerD

DNA sequence :
ATGATGCGTTCGCATATCGAGTCATTTCTTCAATATATGACAGTTGAAAAGCGGATGTCCGCGAATACGAGACAGGCGTA
TGCGAGCGATTTGACGCAGTACGCATCGACCTTGACCCAACTTGGGGTAGAAGAGTGGAATGAGGTGACACGTTCGCATA
TCGTCAAACATATCGAAGAGCTGTCGCAAGCGGGGCGAGCCTCGTCTTCATTGAGACGAGCAGTCAGTTCAATCCGGATG
TTCCATCATCATCTAAAAATGACCGGAGTCACGACGACTGATCCGTCACTTTACCTAGAATCTCCAAAAGCAGAAAAGCA
ACTTCCGGACACGTGGTCACAAACGGAAGTCGAGCGACTGTTGGACAGCGTCCCGACGTCGGACCCGCTCTCACTACGAG
ACCGGGCTATGCTGGAGTTGCTTTACGGGACGGGGATGCGGGTCAGTGAACTTTTAGGTTTGGATTTGGATGATTTGCAG
TTCGAATTGGGGTATCTACAATGTGAAGGGAAAGGCGAGCGCGCACGAATCATCCCGGTATCCTCGGTCGCCCAAAGTTT
CGTCGAGCGTTACATCCAACAAGCTCGTAACGGACTTGGCGGTAGAGAGACCGAAGCGCTCTTTTTAAACGGCCGAGGAG
GACGGCTCAGTCGTCAAGGATTTTGGAAGATGATCAAACGACGAGCCAAACTTGCTGGAATTGAAAAAGAGATCACACCT
CACGTACTCCGTCATTCCTTTGCGACACACCTTCTCGAGAACGGTGCGGATTTACGCGCCATTCAACAGATGCTCGGTCA
TGCGGATTTAGCGACGACGCAAGTGTATACACACGTCAACAAATCGCGTCTACATGATGTGTATCGTAAGCATCACCCTC
GTGCCTAG

Protein sequence :
MMRSHIESFLQYMTVEKRMSANTRQAYASDLTQYASTLTQLGVEEWNEVTRSHIVKHIEELSQAGRASSSLRRAVSSIRM
FHHHLKMTGVTTTDPSLYLESPKAEKQLPDTWSQTEVERLLDSVPTSDPLSLRDRAMLELLYGTGMRVSELLGLDLDDLQ
FELGYLQCEGKGERARIIPVSSVAQSFVERYIQQARNGLGGRETEALFLNGRGGRLSRQGFWKMIKRRAKLAGIEKEITP
HVLRHSFATHLLENGADLRAIQQMLGHADLATTQVYTHVNKSRLHDVYRKHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-49 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-49 42