Gene Information

Name : EAT1b_1941 (EAT1b_1941)
Accession : YP_002886310.1
Strain : Exiguobacterium sp. AT1b
Genome accession: NC_012673
Putative virulence/resistance : Unknown
Product : alpha amylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 1901790 - 1903439 bp
Length : 1650 bp
Strand : +
Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bcy:Bcer98_2716 alpha amylase catalytic region

DNA sequence :
ATGAAACAATGGTGGAAAGAAGCGGTCGTATATCAAATTTATCCACGTAGCTTCAATGACTCAAACGGTGATGGGATTGG
CGACATTCAAGGAATCACGGAGAAGATGTCTTATTTGGCAGAACTCGGGATCGACGTCATCTGGCTCTCGCCGGTATACG
ATTCACCGAACGACGACAATGGATACGATATTCGTGATTACCGTGCCATCATGGACGAGTTTGGTACGATGGATGACTTC
GATGCGATGCTTGAAGAAGCACACCGTCACGGGATTAAAATCATGATGGACCTCGTCGTCAATCACTCTTCGGACGAACA
CCAATGGTTCATGGAGTCACGTTCTTCAAAAGACAGCCCATATCGTGACTATTACATTTGGAAAAAAGGGAAAGATGGTC
AACCTCCGACGAACTGGGGGGCTTTCTTCGGCGGCAGCGCTTGGCAGTATGATGAGGCGAGTGATGAGTACTACCTCCAC
CTCTTCAGTAAGAAACAACCGGATTTGAACTGGGAAAGCGAGACGCTTCGTCGTGAAGTGTACGACCTCATGACATATTG
GCTCGATAAAGGGGTCGACGGGTTCCGGATGGACGTCATCAATATGATTTCAAAAGACCCGAGCTATCCAGACGGTCAAA
CGCAAGGAACGGGGTATGGAGACGGGACACCATTCTTCTTTAACGGACCACGCATCCATGAATTCATGCAGGAGATGAAT
CGTGAAGTCTTATCGAAATATGACACGATCACGGTCGGGGAGATGCCAGGGGTCAGTGTAGAGGAAGCAAAACTTTATAC
GGGTGAAGACCGAAACGAACTGAACATGGTCTTTCATTTTGAACATGTGGATGTCGGGAACGGGAGCTTCGGGAAGTGGA
ATCCGACAGACTGGAAGTTGACTGAGCTGAAGACGATTTTTTCGCGTTGGCAAGAAGGGCTCGAAGAGGAAGGATGGAAC
AGCCTGTACTGGAGTAATCATGACCAGCCCCGTGCCATCTCGCGCTTCGGGAACGATTCGCCTGAATATCGCGTCCGTTC
CGGGAAGATGCTTGCGACACTTCTTCATCTATTGAAAGGGACACCTTACATTTATCAAGGGGAAGAGTTCGGCATGACGA
ACGTCGCGTTTGATTCAATCGATCAGTACCGAGATATTGAGACGTTGAACGCCTACCGTGATTACACATCAAAAGGGTTG
TTAACGCACGACGAGATTTTCCGTGGCATCCATGAGCGAGGACGTGACAATTCACGCACACCGGTACAGTGGTCAGACGA
AGCACATGGTGGATTTACGACAGGGACGCCGTGGATCGAGGTCAATCCGAACTATGTCGATATCAATGCGGAAGCGGCAC
AGAAAGACCCGAATTCGCTCTTCCATTACTACCGTCAATTGATTGCGCTCCGTAAAGCCAATCCGCTCGTTGTCTATGGA
AAGTATGAGCTGTTATTACCGGAAGATGAGGCAATCTATGCGTTCACACGTTCGTTCGAAGGAGAGGCATGGCTCGTGCT
TTGTAACTTCTCAGGTGACACACAACAACGTGACTTACCATATGACGTAAAAGAACGCGTCATCGGAAACATGGAACCGA
TTGAACCGTTCACCCTTCGTCCTTACGAAGCACAAGTGTATAAACTGTGA

Protein sequence :
MKQWWKEAVVYQIYPRSFNDSNGDGIGDIQGITEKMSYLAELGIDVIWLSPVYDSPNDDNGYDIRDYRAIMDEFGTMDDF
DAMLEEAHRHGIKIMMDLVVNHSSDEHQWFMESRSSKDSPYRDYYIWKKGKDGQPPTNWGAFFGGSAWQYDEASDEYYLH
LFSKKQPDLNWESETLRREVYDLMTYWLDKGVDGFRMDVINMISKDPSYPDGQTQGTGYGDGTPFFFNGPRIHEFMQEMN
REVLSKYDTITVGEMPGVSVEEAKLYTGEDRNELNMVFHFEHVDVGNGSFGKWNPTDWKLTELKTIFSRWQEGLEEEGWN
SLYWSNHDQPRAISRFGNDSPEYRVRSGKMLATLLHLLKGTPYIYQGEEFGMTNVAFDSIDQYRDIETLNAYRDYTSKGL
LTHDEIFRGIHERGRDNSRTPVQWSDEAHGGFTTGTPWIEVNPNYVDINAEAAQKDPNSLFHYYRQLIALRKANPLVVYG
KYELLLPEDEAIYAFTRSFEGEAWLVLCNFSGDTQQRDLPYDVKERVIGNMEPIEPFTLRPYEAQVYKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 1e-154 57