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Name : EAT1b_1378 (EAT1b_1378) Accession : YP_002885750.1 Strain : Exiguobacterium sp. AT1b Genome accession: NC_012673 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1348610 - 1350520 bp Length : 1911 bp Strand : - Note : PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: bca:BCE_5395 caspsu DNA sequence : ATGAGTACTCCAACTGTTCGGTCTCCCATTGATCGAAAAAATGCGCTCTTGATGTTACTCGATATCACGATTGCAGGGCT CGCGATTTTTGTGACGTTTGACCTATTCTTTGCGAATGATCCGACGGTAACGTCTGACCCGCTAGATTTGATCACGATCC TCGGATTGAAGACGCTCGTTCTTCTCATTTTAGGATGGGTGACTCGGGTATACCGAATCGACTGGCGATACGGATCGATG CGTGAGTTGCAATTACTGGCGATTGTGTTGGTCATGAGTGACACGTTCGTCTTATTCGCATCATACGTATTATTGGATGG CTTTTCCTATCAAGCGATTTTTATTCAAAGCTTACTCGCATTTAACGGCATGTTATTTATCCGACTCGTCGCTAGGACAC GATCGTTTTTCCAATTTCACGCACCGGTGTCGAATGGAAAAGCTACCTTGGTCATCGGTGGTGGCGAATCGGGTCAAAAA ATCATTAAAGAACTGAAAGAACATCGAACGAATGTGCTACATGTGGTCGGGGTGTTGGATGATAATCCAATGCTTCACCG TCTCTACATTCACGGGACACCGGTCATCGGTTCAATCGATTTACTGGAACGAAAAATTGAAGAATTGAATATCGAAGTGG TCGTGTTGGCCATTCCTTCTCTTCCATATGGAGATCGAGTCCAACTATTGAAACGAATCGAAAAGACAGGCGTCGAATCT CATGCACTGCCGATGCTTGCGGAACTCGCATCCGGAAAGGTGTCATTAAATGAGATTCGAGAAGTGGCCATCGAAGATTT GCTCGGCCGTGAACCAGTTCAGCTCGACGTTTCGGAAATCTCTCAGACGTTGAGTGGATTGACCATTTTCATCTCGGGTG CGGGAGGGTCGATTGGCTCAGAGCTTTGTCGTCAATTGATGAAATTCAATCCTGGCAAACTGATCCTGTTTGGACATGGC GAGAATAGCATATATGCAATCGATCGGGAACTCCGCTTACTCGGATCTGATACAGAGATTTGTCCTGTCATCGGTGACGT CCAAGACCGGGCACGGGTGACGGAAGTGTTTGATCAGTATCGACCGGACGTCGTCTATCATGCGGCAGCCCATAAGCACG TTCCGCTCATGGAAGACAACCCGAGAGAGGCTGTGAAAAACAATATATACGGAACGAAGAACATGGTCGAAGCCGCCGAT TTCTTTGAAGTGAAGCGCTTCGTCATGATCTCTACAGATAAGGCGGTCAATCCAACAAACGTGATGGGTGCAACGAAACG AGTAGCAGAAATGATCGTCCAACAGCAGGCTCGCCACAGCGAAACGACATTCTCGGTCGTTCGTTTCGGCAACGTCTTAG GAAGTCGTGGCTCCGTCGTTCCGCTCTTTAAAGAACAAATTCAACGGGGCGGACCGATTACGGTGACGCATCCAGAGATG ACCCGATACTTTATGACCATCCCGGAAGCGAGTCGCCTCGTCATTCAAGCGAGCGTGCGCGCAAATGGGGGCGAAGTGTT CGTACTAGATATGGGGAATCCCGTCAAAATTGTGGACTTGGCGAAACGGATGATTACACTGAGCGGTTTCACCCTCGAAC AAATCCCGATTCATTTCAGTGGCATTCGTCCTGGTGAGAAGCTGTTCGAAGAACTGCTCGCAACGAGCGAACATACGAAT CAAGTATATGAAAAGATTTTCGTCGGTTGTACAAGACCCTTTAAATCGGTTGATCCGATTTTGAAAACGATTGAATATCT ACTCGATCAATCGAATGGACTCACTTCTTTCTTGTTGTTTGTCGCAAACAACGAACTGCCAGAAGAAGTGATGGAAAGTA TTTTTGCGCCACAAATCGAACCGGTACGCATGCGAGTCAACGAGTCAACGCAAAGGAGGAAGTCGTTATGA Protein sequence : MSTPTVRSPIDRKNALLMLLDITIAGLAIFVTFDLFFANDPTVTSDPLDLITILGLKTLVLLILGWVTRVYRIDWRYGSM RELQLLAIVLVMSDTFVLFASYVLLDGFSYQAIFIQSLLAFNGMLFIRLVARTRSFFQFHAPVSNGKATLVIGGGESGQK IIKELKEHRTNVLHVVGVLDDNPMLHRLYIHGTPVIGSIDLLERKIEELNIEVVVLAIPSLPYGDRVQLLKRIEKTGVES HALPMLAELASGKVSLNEIREVAIEDLLGREPVQLDVSEISQTLSGLTIFISGAGGSIGSELCRQLMKFNPGKLILFGHG ENSIYAIDRELRLLGSDTEICPVIGDVQDRARVTEVFDQYRPDVVYHAAAHKHVPLMEDNPREAVKNNIYGTKNMVEAAD FFEVKRFVMISTDKAVNPTNVMGATKRVAEMIVQQQARHSETTFSVVRFGNVLGSRGSVVPLFKEQIQRGGPITVTHPEM TRYFMTIPEASRLVIQASVRANGGEVFVLDMGNPVKIVDLAKRMITLSGFTLEQIPIHFSGIRPGEKLFEELLATSEHTN QVYEKIFVGCTRPFKSVDPILKTIEYLLDQSNGLTSFLLFVANNELPEEVMESIFAPQIEPVRMRVNESTQRRKSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 9e-98 | 54 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-101 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EAT1b_1378 | YP_002885750.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 6e-97 | 49 |
| EAT1b_1378 | YP_002885750.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 1e-71 | 41 |
