Gene Information

Name : EAT1b_1234 (EAT1b_1234)
Accession : YP_002885606.1
Strain : Exiguobacterium sp. AT1b
Genome accession: NC_012673
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1210961 - 1211986 bp
Length : 1026 bp
Strand : -
Note : PFAM: transport system permease; KEGG: oan:Oant_2826 transport system permease

DNA sequence :
ATGATGCAAACACAAATCAAACAGATGCACACGCCAAAGCACTTTCCGCTTCTCTTGATCGGAACGCTTGTACTGACGGT
GCTGTGCATCTTGGCATCCCTTGCCTTCGGCTCACGAACAGTCGGGTGGAATGAACTGCTGGACGGTTTATTCCGTCCGG
CTGTTCAGTCGTATGAGGCAGACATTGTCCGGGAGCGGGTCATCCGGACAATCTTTAGTTTCATGTGTGGCGCAGCACTT
GGTGTGGCGGGGGCGCTCATGCAGTCGGTGACGCGTAACCCGATTGCCGATCCGAGCATCCTTGGGGTCAACACGGGAGC
AGCGCTCGCCGTCGTCATCGGGATCGCGTTCTTCAATATTTCGACAGCGAGTGCGTTCATCTGGTTCGCGCTCGTCGGGG
CGCTATTGACGGCCATTTTCGTTTTCGGTATCGGTTCGCTTGGAAGAGGAGGGGCGACCCCGCTCAAACTCGTCTTAGCG
GGAGCGGCGACAAGTGCAGCACTATCGTCGCTCGTCATGGCGCTCATGATTCCACGCTCGAACGTCATGGATCAGTTCCG
TTTTTGGCAAGTTGGGAGTGTCGGTGCAGGAAATCTGGATTCGATTTATACCTTTTTACCGTTTCTTTTAATCGGTCTCG
TGATTGCGGTCGTGACCGCGCCTTCTTTGAACGCACTCGCACTCGGGGAGGAGATGGCGAAGAGCCTCGGCGTTCGAACA
GGCACGTTGAAACTGACCGCCTCGTTCGCCGGCGTGATTTTGTGTGGGGCGGCGACAGCGCTTGCCGGACCGATCGGATT
TATCGGGCTACTCGCACCCCATTTGATTCGCCTCGTGCTCGGTCCGGATCAGCGCTATCTCATGCCGATGTCCGCTTTTG
CGGGCGCCATCATTTTAACTTTCTCGGACGTCATCGGACGTTTGCTCGGAAGCCCGGGTGAGCTCGAGGTCGGGATTGTG
ACGGCGTTCATCGGGGCACCGATCTTGATTCTATTGACAATGAAAGTAAAGGTAAGAGGACTATGA

Protein sequence :
MMQTQIKQMHTPKHFPLLLIGTLVLTVLCILASLAFGSRTVGWNELLDGLFRPAVQSYEADIVRERVIRTIFSFMCGAAL
GVAGALMQSVTRNPIADPSILGVNTGAALAVVIGIAFFNISTASAFIWFALVGALLTAIFVFGIGSLGRGGATPLKLVLA
GAATSAALSSLVMALMIPRSNVMDQFRFWQVGSVGAGNLDSIYTFLPFLLIGLVIAVVTAPSLNALALGEEMAKSLGVRT
GTLKLTASFAGVILCGAATALAGPIGFIGLLAPHLIRLVLGPDQRYLMPMSAFAGAIILTFSDVIGRLLGSPGELEVGIV
TAFIGAPILILLTMKVKVRGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 2e-56 49
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 1e-56 49
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-28 42
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-28 42
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-28 42
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EAT1b_1234 YP_002885606.1 transport system permease VFG0926 Protein 2e-34 43