Gene Information

Name : Bcav_0458 (Bcav_0458)
Accession : YP_002880483.1
Strain : Beutenbergia cavernae DSM 12333
Genome accession: NC_012669
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 510959 - 511825 bp
Length : 867 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
GTGCCGCGCCACGCCTCACCCAGCCCCGAGACCACCGGAACCCACCCGACCGAGTCGCCGGGCGCCGTCGTCGACCCCAC
CGGTGCGCCGGCCGCGGCCGGCGACGCGCTGCACTCCCCCGGTCCGGTCGGCGACGCGATCGTCACGGCCCGCGACCTCG
TCAAGGTGTACGGCGCCGGGTCGACGGCGGTGCACGCGCTGCGCGGCGTCGACGTCGACTTCGCGCGCGGCGCGCTGACG
GCGATCATGGGCCCGTCCGGGTCCGGGAAGTCGACGCTCATGCACTGCCTCGCCGGGCTGGACACGGCGACGTCCGGCAC
AGTCACCGTGGATGGCCAGCGCGTGAGCGACATGTCGCAGCGGCAGCTCACCGCGCTGCGCCGCACGCACATCGGGTTCG
TGTTCCAGGCGTACAACCTCGTCCCGACCCTCACCGCCGCCGAGAACATCACCCTGCCGATGGACATCGCCCGGGCGGGC
GTCGACCGCGAGCGGTTCGACGCCGTCGTCGACGCCGTCGACCTGCGCGACCGGCTCGATCATCGCCCGAGCGAGCTCTC
CGGCGGCCAGCAGCAGCGCGTCGCCGTCGCCCGCGCGCTCGTGGCGCGCCCCGCCGTCGTCTTCGCCGACGAGCCGACCG
GCAACCTCGACTCCCGCAGCGCCGGCGACCTGCTGGAGTACCTGCGACGCAGCGTCGACGACCTCGGCCAGACGATGGTC
ATGGTCACGCACGACCCGCGCTCCGCCGCGTTCGCCGACCGGGTGCTCTTCCTCGCCGACGGCCGCATCGTCGGGGAGCT
GGAGCAGCCCACGCAGACCGGGATCCTCGACGCGCTCGGCGAGCTCACGCCCGAGACCGAGCGCTGA

Protein sequence : 
MPRHASPSPETTGTHPTESPGAVVDPTGAPAAAGDALHSPGPVGDAIVTARDLVKVYGAGSTAVHALRGVDVDFARGALT
AIMGPSGSGKSTLMHCLAGLDTATSGTVTVDGQRVSDMSQRQLTALRRTHIGFVFQAYNLVPTLTAAENITLPMDIARAG
VDRERFDAVVDAVDLRDRLDHRPSELSGGQQQRVAVARALVARPAVVFADEPTGNLDSRSAGDLLEYLRRSVDDLGQTMV
MVTHDPRSAAFADRVLFLADGRIVGELEQPTQTGILDALGELTPETER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcav_0458 YP_002880483.1 ABC transporter NC_008702.1.4606598. Protein 4e-25 45
Bcav_0458 YP_002880483.1 ABC transporter CP001581.1.gene598.p Protein 3e-34 44
Bcav_0458 YP_002880483.1 ABC transporter CP001581.1.gene798.p Protein 3e-28 41