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Name : Bcav_3915 (Bcav_3915) Accession : YP_002883918.1 Strain : Beutenbergia cavernae DSM 12333 Genome accession: NC_012669 Putative virulence/resistance : Unknown Product : N-6 DNA methylase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 4334616 - 4336241 bp Length : 1626 bp Strand : - Note : PFAM: N-6 DNA Methylase; TIGRFAM: type I restriction system adenine methylase (hsdM) DNA sequence : ATGCCACCGAGGCGTAAGCGAGCCGAGGCGTTGCCGACCGCAGCGACGACGATGAAGGAGCTCAAGGACACGCTCTGGAA GGCCGCCGACAAGTTGCGCGGCTCGATGGACGCGAGCCAATACAAGGACGTGATCCTGGGCCTGGTGTTCCTGAAGTATG TGTCGGACGCGTTCGACGAGCGTCGGGCGGTGATCGCAGCGGAGCTCGCGGCGGACGGCATCGGCGAGGAGCAGGCAGGG CCGTTGCTCGAGGAGGTCGACGAGTACCGCGCCGCCGGTGTCTTCTGGGTGCCGCCTCGGGCGCGCTGGGGGTACCTGGC GCAGCACGCGAAGGGGCGCCCCGCCGGCGATCCCGAGGGGCAGGCGACGATCGGCGAGCTGGTCGACGAGGCGATGGTCC TGATCATGGGGACGAACCCCGCGCTCGCGACGACGCTGCCGCAGATCTTCAACAAGGAGAACGTCGACCAGCGTCGCCTC GGCGAGCTGATCGACCTGTTCAACTCGGCTCGGTTCACGGGCGACGGCGCCCGGAAGGCGCGCGACGTGCTCGGCGAGGT CTACGAGTACTTCCTGGGAAAATTCGCCGCGGCCGAGGGGAAACGGGGCGGCGAGTTCTACACGCCGCCCGGCGTGGTGC GGGTGCTCGTCGAGGTGCTCGAGCCGTATCGCGGGCGCGTGTACGACCCGTGCTGCGGGTCCGGCGGGATGTTCGTGCAG GCGGAGAAGTTCATCGAACGGCATGGCGAGGACCCGCAGGCGATCAGCGTCTACGGCCAGGAGCTGAACGAGCGCACGTG GCGCATGGCGAAGATGAACCTCGCCGTGCACGGGCTGACGGCGCAGCTCGGGCCGCGGTGGGGCGACACGTTCGCGCGCG ACGTCCACCCCGACGTCCAGATGGACTTCGTGATGGCGAACCCGCCGTTCAACATCAAGGACTGGGCGCGGAACGCCGAG GACGCGCGCTGGAAGTTCGGCGTCCCGCCCGCCGGGAACGCCAACTACGCGTGGATCCAGCACATCCTGTCGAAGCTCGC GCCGGGCGGGTCGGCGGGCGTGGTGATGGCGAACGGATCGATGTCCTCGAACTCCGTGGGTGAGGGGGAGATCCGGGCGG CGCTCGTGGAGGTTGACCTCGTCTCGTGCATGGTGGCGTTGCCGACGCAGCTATTCAGATCGACAGGCATCCCGGTGTGC GTGTGGTTCTTCGCGAAGTCCAAGGCTGCGGGTGCCTCTGGGTCGGTCGATCGAACCGGGCAGGTCCTGTTCATCGACGC GCGGAACCTGGGGCACATGGTGACGCGGGCTGAGCGGGAGCTCTCCGACGAGGACATCGCCCGGATCGCTGGGACGTTCC ACGCGTGGCGGGGGGCACCGTCCGCTTCGGGGGCGTCCTACGAGGACGTGCCCGGGTTCTGCTACTCGGCGACGCTGTCG GAGATCAAGGAGGCCGGATACGCGCTCGCGCCCGGGCGGTACGTCGGTGCCCCCGAGGTGGAGGACGACGGTGAGCCGAT CGAGGAGAAGATCGAGCGGCTGACGGCGGAGCTGTTCGCGCAGTTCGAGGAGTCCGCGCGGCTGGAGCAGGTCGTACGCG AGCAACTGGGGAGGGTTCGTGGCTAG Protein sequence : MPPRRKRAEALPTAATTMKELKDTLWKAADKLRGSMDASQYKDVILGLVFLKYVSDAFDERRAVIAAELAADGIGEEQAG PLLEEVDEYRAAGVFWVPPRARWGYLAQHAKGRPAGDPEGQATIGELVDEAMVLIMGTNPALATTLPQIFNKENVDQRRL GELIDLFNSARFTGDGARKARDVLGEVYEYFLGKFAAAEGKRGGEFYTPPGVVRVLVEVLEPYRGRVYDPCCGSGGMFVQ AEKFIERHGEDPQAISVYGQELNERTWRMAKMNLAVHGLTAQLGPRWGDTFARDVHPDVQMDFVMANPPFNIKDWARNAE DARWKFGVPPAGNANYAWIQHILSKLAPGGSAGVVMANGSMSSNSVGEGEIRAALVEVDLVSCMVALPTQLFRSTGIPVC VWFFAKSKAAGASGSVDRTGQVLFIDARNLGHMVTRAERELSDEDIARIAGTFHAWRGAPSASGASYEDVPGFCYSATLS EIKEAGYALAPGRYVGAPEVEDDGEPIEEKIERLTAELFAQFEESARLEQVVREQLGRVRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 9e-137 | 52 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 2e-135 | 51 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 6e-136 | 51 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 3e-115 | 46 |
