Gene Information

Name : Bcav_3888 (Bcav_3888)
Accession : YP_002883892.1
Strain : Beutenbergia cavernae DSM 12333
Genome accession: NC_012669
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 4309132 - 4309845 bp
Length : 714 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGAGCGCCATCGCCATCTCGGGCCTGCGCAAGAGCTACGGCCCCGTCCACGCCGTCGACGACGTCACGTTCGCCGTCGA
GCCCGGCCGCGTCGTCGGGCTGCTCGGGCCGAACGGCGCGGGCAAGAGCACGACGCTCGGCGTCCTGCTCGGCCTCGTCG
CCGCCCACGCCGGCTCGGCCACGATCCAGGGCCGGGCCTACGCCGACCTGCCGCGGCCCTCGCACGTCGTCGGCGCGCTC
CTCGACGCCGGCGGGCAGCACCCGGGCCGCACCGGCCGCGACCACCTGCGCGTGCTCGCCACGGCGGCGCGCCTGCCGCT
CGAGCGGGTCGAGGAGGTGCTGGACCTCGTCGGCATGACCCCGGCCGCGCACCGCCGCGTGCGCACGTACTCGCTCGGCA
TGAGGCAGCGGCTCGGCCTGGCCGCCGCCCTCCTCGGCCGGCCCGAGGTCCTCGTGCTCGACGAGCCCGCCAACGGACTC
GACCCCGCCGGCATGCGGTGGCTGCGCACGCTGCTGCGGTCGTTCGCCGACGACGGCGGTGCCGTCCTCCTGGCCAGCCA
CGTCCTCGCGGAGGTGGCGCAGGTGGCGGACGACGTCGTCGTCATCGGCCACGGGCGGGTCCTCACCGCCGGCCCGCTCA
CCGACCTCGTGACCGACAGCTCACTCGAGGACGTCTACCTCGACCTCACCGCCGCCACCGAAGGAGTCCGCTGA

Protein sequence : 
MSAIAISGLRKSYGPVHAVDDVTFAVEPGRVVGLLGPNGAGKSTTLGVLLGLVAAHAGSATIQGRAYADLPRPSHVVGAL
LDAGGQHPGRTGRDHLRVLATAARLPLERVEEVLDLVGMTPAAHRRVRTYSLGMRQRLGLAAALLGRPEVLVLDEPANGL
DPAGMRWLRTLLRSFADDGGAVLLASHVLAEVAQVADDVVVIGHGRVLTAGPLTDLVTDSSLEDVYLDLTAATEGVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 3e-29 46
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 7e-25 43
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 7e-25 43
DIP0755 NP_939128.1 lantibiotic ABC transporter ATP-binding protein Not tested Not named Protein 2e-23 43
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 5e-17 41