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Name : Bcav_0379 (Bcav_0379) Accession : YP_002880405.1 Strain : Beutenbergia cavernae DSM 12333 Genome accession: NC_012669 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 424443 - 425714 bp Length : 1272 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGATCGACCTCAAGGCTCTGCGCGAGAATCCCGACGTCGGCCGGGCCAGCCAGCGCTCTCGCGGCGAGGATCCCGAGCT CGTGGACCGGCTGCTCGACGCCGACGCCCGGCACCGTGCGTTGCTCACCTCGTTCGAGCAGCAGCGCGCGGAGCAGAAGG AGCTCTCGCGCGCCGTCGGGAAGGCCGCCCCGCAGGATCGCCCGGCCGTCCTGGCGCACGCGAAGTCGCGCGCGGAGCAG GTGAAGTCCGCGGAGGCCGACGCCGACCGGGCCAGGGCGGAGCTCGACGCGCTGCTCTCCCGGATGCCGAACATCGTGGC CGACGGCGTCCCACCGGGCGGCGAGGACGACTACGTGGTGCTGCGGCACGAGGGCACCCCGCGCGACTTCGCCGCGGAGG GCTTCACGCCGCGGGACCATCTCGAGCTGGGCGAACGGCTCCGCGCGATCGACACGGAGCGCGGCGCGAAGGTCTCGGGG GCGCGGTTCTTCTACCTCACCGGTCTCGGCGCCCGGCTCGAGCTCGCGCTCCTCAACGCGGCGATCGACAAGGCGCTCAC GGCAGGTTTCACGCCGGTCATCACGCCGACGCTCGTGAAGCCGGAGATCATGGCCGGCACGGGGTTCCTCGGTGCGCACG CCGAGGAGGTGTACCGGATCGAGAAGGACGACCTGTATCTCGTGGGGACGAGCGAGGTGGCGCTCGCCGGCTATCACGCG AACGAGATCGTCGACCTCTCCGACGGCCCGCTGCGCTACGCCGGCTGGAGCGCGTGCTACCGGCGCGAGGCCGGCTCGCA CGGGAAGGACACGCGCGGCATCATCCGCGTGCACCAGTTCCACAAGGTGGAGATGTTCTCGTACGCGCGCCTCGAGGACG CCGCCGTCGAGCACGAACGGCTGCTCGCCTGGGAGGAGGAGCTGCTCCGCCTGGTCGAGCTCCCGTACCGCGTGATCGAC ACGGCGGCCGGCGATCTCGGCTCGAGCGCCGCGCGGAAGTTCGACTGCGAGGCGTGGCTCCCGACGCAGGAGCGCTACCT CGAGCTGACGTCGACGTCGAACTGCACGTCGTTCCAGGCGCGGCGGCTCGGCACCCGGGAGCGCCTCGAGGACGGCTCGA CCCGACCCGTCGCCACGCTCAACGGGACGCTCGCCACGACCCGGTGGATCGTCACGATCCTGGAGAACCACCAGAACCCC GACGGGTCCGTGCGCGTCCCGGCCGGCCTGCAGCCGTATCTCGGCGGGCTGACGGAGCTGCGCGCCTCATGA Protein sequence : MIDLKALRENPDVGRASQRSRGEDPELVDRLLDADARHRALLTSFEQQRAEQKELSRAVGKAAPQDRPAVLAHAKSRAEQ VKSAEADADRARAELDALLSRMPNIVADGVPPGGEDDYVVLRHEGTPRDFAAEGFTPRDHLELGERLRAIDTERGAKVSG ARFFYLTGLGARLELALLNAAIDKALTAGFTPVITPTLVKPEIMAGTGFLGAHAEEVYRIEKDDLYLVGTSEVALAGYHA NEIVDLSDGPLRYAGWSACYRREAGSHGKDTRGIIRVHQFHKVEMFSYARLEDAAVEHERLLAWEEELLRLVELPYRVID TAAGDLGSSAARKFDCEAWLPTQERYLELTSTSNCTSFQARRLGTRERLEDGSTRPVATLNGTLATTRWIVTILENHQNP DGSVRVPAGLQPYLGGLTELRAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-54 | 47 |
