Gene Information

Name : Bcav_3397 (Bcav_3397)
Accession : YP_002883401.1
Strain : Beutenbergia cavernae DSM 12333
Genome accession: NC_012669
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1082
EC number : -
Position : 3794533 - 3795288 bp
Length : 756 bp
Strand : -
Note : PFAM: Xylose isomerase-like TIM barrel

DNA sequence :
GTGTCTGCTTCGACCTCGACCCTGTCCGTCCAGCTCTACTCGGTACGTGAGCGCCTCGACGAGGACTTCCTCGGCACGCT
GCGCGCGCTGGCCGACCTCGGGTTCACCCAGGTCGAGCCGTTCGGGTTCACCCCGGACGTCGCCCTGACGTACTCGCAGG
CGTTCGCCGAGACCGGGCTGTCCGCGCCGACGACGCACGCCGGCATCCTCGACGCCCCCGACCAGGCCGAGCTCTTCGCC
GCCGCCGCGCACGCCGGCGTCCGCACGGTGATCCTGCCGAGCAGCGCCCAGGAGCGGTGGACCGACGCCGCCGGGCTCGA
GGGCATCGCCGCCGACCTCAACGCCGCCGCGGCGCTCGCGTCCGAGCACGAGGTCCGCGTCGGGTACCACAACCACTGGT
GGGAGCTCGAGAACACCGTCGACGGCGTCCCGGCGCTCGAGGCGCTCGCCACCCGGCTGGACGACGGCGTCGTCCTCGAG
GTCGACACGTACTGGGCCGAGGTCGGTGGCGTGGACGCCGTCGGCCTGCTCGGGCGTCTCGGCGAGCGCGTCGTGGCGAT
CCACGTCAAGGACGGCGACCGCTCGCGCGACACCAAGAAGCAGCAGCCCGCCGGCCAGGGCGACGTGCCGGTGCTCGACA
TCCTCGCCGCCGCGCCGGACGCGCTGCGCGTCATCGAGTTCGACGACTACGACGGCGACCGCCTCGAGGGCATCGCCGCG
TCCGTCGCGTACCTGCGCGAGCACGGGATCTCATGA

Protein sequence :
MSASTSTLSVQLYSVRERLDEDFLGTLRALADLGFTQVEPFGFTPDVALTYSQAFAETGLSAPTTHAGILDAPDQAELFA
AAAHAGVRTVILPSSAQERWTDAAGLEGIAADLNAAAALASEHEVRVGYHNHWWELENTVDGVPALEALATRLDDGVVLE
VDTYWAEVGGVDAVGLLGRLGERVVAIHVKDGDRSRDTKKQQPAGQGDVPVLDILAAAPDALRVIEFDDYDGDRLEGIAA
SVAYLREHGIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0034 YP_001220773.1 putative sugar phosphate isomerase/epimerase Not tested chp/tomA region Protein 4e-35 45
CMM_0111 YP_001220850.1 putative sugar phosphate isomerase/epimerase Not tested chp/tomA region Protein 8e-35 44