Gene Information

Name : Bcav_3176 (Bcav_3176)
Accession : YP_002883182.1
Strain : Beutenbergia cavernae DSM 12333
Genome accession: NC_012669
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3531491 - 3532300 bp
Length : 810 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
GTGACCCGCGGGCGGCGCGCCGCGGAGCGCGAGCCTTCGCCGGACGGCGCCGCGACCGGTCCCGTGCTCCTGGCGCTCGC
GGGTGTCTCGCGCGTCCACGGCACCGGGCCGACGGCCGTGCACGCGCTCGACGACGTCGACCTGCGGGTGCGGATGGGCG
AGCTCGTCGCCGTGATGGGGCCGTCCGGGTCGGGGAAGTCCACGCTGCTCAACCTGGCGGGCGGCCTCGACACCCCGACG
TCGGGCAGAGTGACGCTCGGCAGGGACGTGCTCTCGGACGTCAGCGCGACCGAGCGGGCCGCGCTGCGCCGTCGTCGCGT
CGGCTACGTCTTCCAGGACCTCAACCTCATCCCCGCGCTCACGGCAGCCGAGAACGTGGCGCTGCCGCGCGAGCTCGACG
GCGTGCGTGCGCGGGCGGCGCGGAAGGAGGCGCTCGCGGCGCTCGACGACGTCGGGCTCGCCGATCTCGCGGATCGCTTC
CCCGAGGAGATGTCCGGCGGGCAGCAGCAGCGGGTCGCGATCGCGCGGGCGCTGGTCGGTCCGCGCCGGCTCGTGCTCGC
CGACGAGCCGACCGGCGCGCTCGACTCGCACACCGGGGAAGCGGTCATGCGGTTGTTGCGCGCACGGGTCGACGCCGGCG
CGGCGGGCCTGCTCGTGACGCACGAGCCGCGCTTCGCGGCCTGGGCGGACCGGACGGTGTACCTGCGGGACGGCGTCGTC
GTCGACGCCTCGCGCGACGACGACGCGGAGGACCTGCTCGTGGGAGCCGCGGCCGGCGCGGCCGGCGAGGACCCGACGTG
GGACGACTGA

Protein sequence :
MTRGRRAAEREPSPDGAATGPVLLALAGVSRVHGTGPTAVHALDDVDLRVRMGELVAVMGPSGSGKSTLLNLAGGLDTPT
SGRVTLGRDVLSDVSATERAALRRRRVGYVFQDLNLIPALTAAENVALPRELDGVRARAARKEALAALDDVGLADLADRF
PEEMSGGQQQRVAIARALVGPRRLVLADEPTGALDSHTGEAVMRLLRARVDAGAAGLLVTHEPRFAAWADRTVYLRDGVV
VDASRDDDAEDLLVGAAAGAAGEDPTWDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-34 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcav_3176 YP_002883182.1 ABC transporter NC_008702.1.4606598. Protein 9e-32 52
Bcav_3176 YP_002883182.1 ABC transporter NC_012469.1.7686878. Protein 5e-35 46
Bcav_3176 YP_002883182.1 ABC transporter NC_012469.1.7685735. Protein 7e-27 43
Bcav_3176 YP_002883182.1 ABC transporter CP001581.1.gene798.p Protein 3e-34 42
Bcav_3176 YP_002883182.1 ABC transporter CP001581.1.gene598.p Protein 2e-31 42