Gene Information

Name : Bcav_3167 (Bcav_3167)
Accession : YP_002883173.1
Strain : Beutenbergia cavernae DSM 12333
Genome accession: NC_012669
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3522011 - 3522667 bp
Length : 657 bp
Strand : +
Note : PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain

DNA sequence : 
ATGAGCCAGATCCTCATCGCGGAGGACTCCGAACGGATCTCCGCGTTCGTCGCCAAGGGTCTGCGTGCCGCCGGGTTCGT
CCCGACGGTGGTGCCGACCGCCCGCGAGGCGTTCGACCTCGCCTCGACCGGCGACTTCGACCTGCTCGTGCTCGACCTCG
GGCTCCCCGACGGGGACGGACTGTCGGTCCTGCGGCGACTGCGCGCCCAGGGCAACCCGATCGCCGTCGTCATCCTCACC
GCACGGGACTCGGTGACCGACACCGTCGCCGGGCTCGAGGGCGGCGCCGACGACTACATGGCGAAGCCGTTCCGGTTCGA
GGAGCTGCTCGCGCGCGTGCGGCTGCGCCTGCGCGGCGCCGTCGCCGACGAGCCGACGGTGCTGCGCCACGGCGAGCTCG
AGCTCGACCTGCGGTCCCGGCGTGCCCGGGTCGACGGACGCGAGGTGGACCTCTCGGCGCGCGAGTTCGCGCTCGCCGAG
ACGTTCCTGCGGCACCCCGGGCAGGTCCTCAGCCGGGAGCAGCTCCTCTCGCGCGTGTGGGGCTACGACTTCGACCCCGG
GTCCAACGTCGTGGACGTGTACGTCCGGTACCTGCGCCGCAAGCTCGGGGCCGACCTCGTCACCACCGTCCGCGGCATGG
GGTACCGCCTCGACTGA

Protein sequence : 
MSQILIAEDSERISAFVAKGLRAAGFVPTVVPTAREAFDLASTGDFDLLVLDLGLPDGDGLSVLRRLRAQGNPIAVVILT
ARDSVTDTVAGLEGGADDYMAKPFRFEELLARVRLRLRGAVADEPTVLRHGELELDLRSRRARVDGREVDLSAREFALAE
TFLRHPGQVLSREQLLSRVWGYDFDPGSNVVDVYVRYLRRKLGADLVTTVRGMGYRLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcav_3167 YP_002883173.1 two component transcriptional regulator BAC0083 Protein 9e-30 47
Bcav_3167 YP_002883173.1 two component transcriptional regulator BAC0197 Protein 8e-27 47
Bcav_3167 YP_002883173.1 two component transcriptional regulator BAC0638 Protein 4e-21 45
Bcav_3167 YP_002883173.1 two component transcriptional regulator BAC0111 Protein 1e-26 43
Bcav_3167 YP_002883173.1 two component transcriptional regulator HE999704.1.gene1528. Protein 1e-26 41
Bcav_3167 YP_002883173.1 two component transcriptional regulator BAC0308 Protein 1e-24 41
Bcav_3167 YP_002883173.1 two component transcriptional regulator BAC0125 Protein 4e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcav_3167 YP_002883173.1 two component transcriptional regulator VFG1389 Protein 1e-29 47
Bcav_3167 YP_002883173.1 two component transcriptional regulator VFG0596 Protein 6e-22 42
Bcav_3167 YP_002883173.1 two component transcriptional regulator VFG1390 Protein 1e-27 41