|
Name : Bcav_1855 (Bcav_1855) Accession : YP_002881873.1 Strain : Beutenbergia cavernae DSM 12333 Genome accession: NC_012669 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 2117333 - 2118757 bp Length : 1425 bp Strand : - Note : PFAM: Glutamine synthetase, beta-Grasp domain; Glutamine synthetase, catalytic domain; TIGRFAM: glutamine synthetase, type I DNA sequence : ATGTTCACCACCGCCGAGGAGGCCATCGCCTTCACGAAGGAGCAGGACGTCAAGTTCGTCGACGTCCGGTTCATCGACCT GCCTGGCGTGCAGCAGCACTTCAACATCCCGGTCGAGGCCTTCAACGAGGACGCCTTCACGGAAGGTCTCATGTTCGACG GCTCCTCGATCCGGGGCTTCCAGGCGATCCACGAGTCGGACATGAAGCTCGTGCCGGACGTCACGAGCGCGTTCGTCGAC CCGTTCCGGGCGCAGAAGACGCTCGTCGTGTACTTCTCGATCGTCGACCCGTTCACCGACGAGCCCTACTCCCGTGACCC CCGGACGATCGCCGCAAAAGCGGAGGCGTACCTGCGCTCGACGGGCATCGCCGACACGGTGTTCTTCGGCCCGGAGGCGG AGTTCTACATCTTCGACGACGTGCGGTTCGAGACGAACCAGCACTCGGGGTACTACTACCTCGACTCCAGCGAGGCCGCG TGGAACACGGGCCGGGTCGAGGAGGGCGGCAACAAGGCGTACAAGACGCGCTACAAGGGCGGCTACTTCCCCGTCTCCCC CGCCGACCAGTTCGCCGACCTGCGCGACTCCATCGTGACGACGCTGCAGGAGGTGGGCCTCGACGTCGAGCGGGCGCACC ACGAGGTCGGCACGGCCGGCCAGCAGGAGATCAACTACCGGTTCAACACGCTGCGTTCCGCGGCCGACGACCTCATGAAG TTCAAGTACGTCGTCAAGAACGTGGTGTGGAACGCCGGCAAGACGGCGACGTTCATGCCGAAGCCGCTGTTCGGTGACAA CGGCTCCGGCATGCACAGCCACCAGAGCCTCTGGAAGGACGGCCAGCCGCTGTTCTTCGACGAGCGCGGGTACGGCGGGC TGTCCGACCTGGCGCGCTGGTACATCGGCGGCCTGCTCAAGCACGCGCCGTCGCTGCTGGCGTTCACGAACCCGTCCGTG AACTCCTACCATCGCCTGGTGCCCGGCTTCGAGGCGCCGGTCAACCTCGTGTACTCGGCGCGCAACCGCTCCGCGTGCAT TCGCATCCCGATCACGGGGACCTCGCCGAAGGCGAAGCGCATCGAGTTCCGCGTGCCGGACCCGTCGGCGAACCCGTACC TGGCGTTCTCGGCGATGCTCATGGCGGGCATCGACGGCATCCGCAACCGGATCGAGCCGCCGGAGCCGGTCGACAAGGAC CTCTACGAGCTGCCGCCGGAGGAGCACGCCCAGATCGCTCAGGTGCCGGACTCGCTGCCCGGCGTGCTCGACGCGCTCGA GGCGGACCACGACTTCCTCACCGAGGGCGACGTGTTCACGCCGGACCTCATCTCGACGTGGATCGACTACAAGCGGACGA ACGAGGTCGACCCGATCCGGCTGCGCCCGCACCCGCACGAGTTCGAGCTGTACTACGACATCTGA Protein sequence : MFTTAEEAIAFTKEQDVKFVDVRFIDLPGVQQHFNIPVEAFNEDAFTEGLMFDGSSIRGFQAIHESDMKLVPDVTSAFVD PFRAQKTLVVYFSIVDPFTDEPYSRDPRTIAAKAEAYLRSTGIADTVFFGPEAEFYIFDDVRFETNQHSGYYYLDSSEAA WNTGRVEEGGNKAYKTRYKGGYFPVSPADQFADLRDSIVTTLQEVGLDVERAHHEVGTAGQQEINYRFNTLRSAADDLMK FKYVVKNVVWNAGKTATFMPKPLFGDNGSGMHSHQSLWKDGQPLFFDERGYGGLSDLARWYIGGLLKHAPSLLAFTNPSV NSYHRLVPGFEAPVNLVYSARNRSACIRIPITGTSPKAKRIEFRVPDPSANPYLAFSAMLMAGIDGIRNRIEPPEPVDKD LYELPPEEHAQIAQVPDSLPGVLDALEADHDFLTEGDVFTPDLISTWIDYKRTNEVDPIRLRPHPHEFELYYDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 9e-96 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bcav_1855 | YP_002881873.1 | glutamine synthetase, type I | VFG1399 | Protein | 4e-160 | 66 |
