Gene Information

Name : Bcav_0140 (Bcav_0140)
Accession : YP_002880167.1
Strain : Beutenbergia cavernae DSM 12333
Genome accession: NC_012669
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 146793 - 147620 bp
Length : 828 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
GTGACCAGCACCATCACGCCGCCCGGCACGGACGGGCGGCTCCGCGCCGAGCACGTGCGGCTCGCGTACGCCGCGCGCAC
GGTCGTCGAGGACCTCACTCTCGCCGTGCCCGACGGCGGCTTCACGGTGATCGTCGGCCCGAACGCGTGCGGGAAGTCCA
CGTTGCTGCGCGCGCTCGGGCGCATGCTGGCGCCGCGCTCGGGCGAGATCGTCCTGGACGGCCGCGCCATCCACTCCTAT
CCGACGAAGGAGATCGCTCGCCGCGTCGGCCTGCTGCCCCAGGCGCCCGTGACGCCGGACGCGATCACGGTGGCCGACCT
CGTGGCGCGGGGCCGCTACCCGCACCAGCGGCTGCTGCGGCAGTGGTCCCCTGCTGACGAGGAGGCCGTCGACGCCGCGC
TCACGCGGGTGGGGATGCGGGACGCCGCGGACCGCCTCGTCGACGAGCTGTCCGGCGGGCAGCGCCAGCGCGTGTGGATC
GCCATGACGCTCGCGCAGGAGACGCCGATCCTCCTGCTCGACGAGCCGACGACGTTCCTCGACGTCGCCCACCAGATCGA
CGTCCTCGACCTGTGCGCGCACCTGCACGAGGGCGGCCGCACGCTCGTCGCCGTGCTGCACGACCTCAACATGGCGGCCC
GGTACGCGACCCACGTCGTGGCGATGCGCGACGGCGCCGTCGTCGCCCAGGGTGCCGCCGAGGACGTCTTCACACCGGAG
CTCGTGCGGGCCGTGTTCGACCTCGACGCCCTGGTGCTGCCGGACCCGGAGACCGGCCGGCCGCTCGTGGTGCCGCGCGA
CCGCCGGCGCGCACGGGCGGGCTCGTGA

Protein sequence :
MTSTITPPGTDGRLRAEHVRLAYAARTVVEDLTLAVPDGGFTVIVGPNACGKSTLLRALGRMLAPRSGEIVLDGRAIHSY
PTKEIARRVGLLPQAPVTPDAITVADLVARGRYPHQRLLRQWSPADEEAVDAALTRVGMRDAADRLVDELSGGQRQRVWI
AMTLAQETPILLLDEPTTFLDVAHQIDVLDLCAHLHEGGRTLVAVLHDLNMAARYATHVVAMRDGAVVAQGAAEDVFTPE
LVRAVFDLDALVLPDPETGRPLVVPRDRRRARAGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-66 54
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-62 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-62 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-62 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-62 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-55 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-54 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-56 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-56 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-56 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-56 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 5e-36 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-62 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-62 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcav_0140 YP_002880167.1 ABC transporter BAC0164 Protein 6e-55 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcav_0140 YP_002880167.1 ABC transporter VFG0925 Protein 3e-71 56
Bcav_0140 YP_002880167.1 ABC transporter VFG1042 Protein 6e-55 45