Gene Information

Name : Bcav_1389 (Bcav_1389)
Accession : YP_002881410.1
Strain : Beutenbergia cavernae DSM 12333
Genome accession: NC_012669
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1581998 - 1582753 bp
Length : 756 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
GTGAGCGGCACGCTCGAGGTGCGCGGCGCCGTCGTCCGCTACGGCGACGTGACGGCGCTCGACGGGGCGGACCTGACCCT
CGTGCCCGGCCGGATCACCGGCCTGGTGGGCACGAACGGCTCGGGCAAGTCCACGCTGTTCAAGGCGATCATGGGGCTGG
TCCCGCTCGCTGGTGGCGTCGTGACGTACGACGGCGCGCCGCTCGCGCGTGCCCGGCGGCGCGGGGTGCTGGGCTTCGTC
CCGCAGTCGGAGGAGGTCGACCAGGGTTTCCCGCTCGCGGTGCGCGACGTCGTCGCCATGGGCAGGTACGCGGGGCTCGG
GCCTACCCGGCGACTGCGCGCACCCGACCACGCCGCCCTCGCCGAGGCGCTCGACGCCGTCGACCTGGAGGACCTCGCCC
ACCGCCAGATCGGGCGACTCTCGGGCGGCCAGCGCAAGCGGGCGTTCGTCGCCCGCGTGCTCGCCCAGCGCGCGCAGGTC
CTGCTGCTCGACGAGCCGTTCGCGGGCGTCGACGTCGTCAGCGAGCGCACGATCTCGCGGGTCCTCCGCCAGCGGGCCGA
CGACGGCGCGGCGGTGCTGATCGCGAGCCACGACCTCGTCGCGCTCCCGGGTCTCGCGGACGACGCGGTGCTGCTCCAGC
GGCACGTCGTCGCGCGCGGCACCCCGGCCGAGGTGCTGGCCCCCGAGGTGCTGGCTCGCGTGTTCGTCGAGTCCGAGGAG
CGGCGCGAGGTGCCGGGCGTGGGGGCGCGGGGATGA

Protein sequence : 
MSGTLEVRGAVVRYGDVTALDGADLTLVPGRITGLVGTNGSGKSTLFKAIMGLVPLAGGVVTYDGAPLARARRRGVLGFV
PQSEEVDQGFPLAVRDVVAMGRYAGLGPTRRLRAPDHAALAEALDAVDLEDLAHRQIGRLSGGQRKRAFVARVLAQRAQV
LLLDEPFAGVDVVSERTISRVLRQRADDGAAVLIASHDLVALPGLADDAVLLQRHVVARGTPAEVLAPEVLARVFVESEE
RREVPGVGARG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-35 46
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-35 46
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-36 46
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-36 46
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-36 46
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-20 43
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-20 43
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 2e-20 43
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcav_1389 YP_002881410.1 ABC transporter BAC0350 Protein 1e-36 46
Bcav_1389 YP_002881410.1 ABC transporter BAC0440 Protein 6e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcav_1389 YP_002881410.1 ABC transporter VFG0526 Protein 1e-36 46