|
Name : Bcav_1163 (Bcav_1163) Accession : YP_002881185.1 Strain : Beutenbergia cavernae DSM 12333 Genome accession: NC_012669 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 1306631 - 1308064 bp Length : 1434 bp Strand : + Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; TIGRFAM: nucleotide sugar dehydrogenase DNA sequence : ATGTCCCGTTCCCTCACCCGCCTGTCCCGTCCGCCGCTCGCCGACCCGCTCGGCGCTGTCCCGGCTCCTGTCCCCGCCGT CAGCGCCCTCGGTACCGACGAGCCGACCGCGCGGCGCCGGGTCGCCGTCGTCGGCACCGGCTATCTCGGTGCCACGCACG CCGCGGCGATGGCCTCGCTCGGCTTCGACGTCGTCGGGGTCGACACCGACGAGAACAAGGTGCGCTCGCTCGAGCTCGGC AAGGTGCCGTTCTTCGAGCCCGGGCTCGCCGAGCTCCTCTCGGCGCAGGTGGCGACCGGGCGGCTGCGCTTCTCCACGGA TGCGGCAGCAGCCGCGGCCGACGCCGACATCCACTTCATCTGCGTGGGCACGCCGCAGCAGCGCGGCTCCCACGCCGCCG ACCTGCGCTTCGTGGAGGCAGCTGCGCGGTCGATCGCGGAGAACCTCACCCACGATGCGCTGATCGTCGGGAAGTCCACG GTGCCGGTCGGGACGGCGGCCCGGCTGCGCGCGCTGGTCGCCGAGCTCGCACCGGCGGGGGTGCGTGCCGAGCTCGTGTG GAACCCGGAGTTCCTGCGCGAGGGCAAGGCCGTCGACGACACGCTCCACCCGGACCGCATCGTGGTCGGCGGTGCGAGCC CCTGGGCCGCCGGCCTGCTCCGCGAGCTGTACGCGGCGCCGATCGCCGCCGGCGCGCCGGTCGTCGAGTGCGACCTCCCG ACGGCGGAGCTCGTCAAGGTGAGCGCCAACGCGTTCCTCGCGACCAAGATCTCGTTCATCAACGCCATCGCGTCGGTGTG CGAGGCGGCCGGCGCCGACGTCACCGTGCTCGCGGACGCGCTCGGTCACGACCCCCGGATCGGGCGCCAGTTCCTCGATG CCGGACTCGGGTTCGGCGGGGGATGCCTCCCGAAGGACATCCGGGCTCTCATGCACCGCGCGCGCGAGCTCGGCGTACAC CGGGCGGCTGGGCTGCTGCAGGAGATCGACGAGATCAACATGGCGCAGCGGGAACGCGTCATCGAGATGGCGACGACGGC GTGCGGCGGCTCCGTGCTCAACCGCCGGGTCGGCGTGCTGGGTGCGGCGTTCAAGCCACGCACGGACGACGTGCGGGACT CGCCGGCCCTCAACGTCGCCGCCGCGCTGCACCTGCGGGGAGCCCAGGTCACCGTCTTCGACCCCGAGGCGGCGGACACC GCGCGGCGCACGTTCCCGACCCTCTCCTACGCGAGCAGCGCAGCGGAGGCGGTGGAGGGGAGCGACGTCGTCCTGCTGCT CACGGAGTGGCAGGAGTTCCTCGACGCCGATCCGGCCGCGCTGGCCGGGCTCACCCCGACCCCGCGGATGATCGACGCGC GCGGGAAGCTCTCGCCGGAGCGGATGCGCGCCGCGGGCTGGGAGTTCGCAGGGCTGGGGCGCGTCGCGGCCTGA Protein sequence : MSRSLTRLSRPPLADPLGAVPAPVPAVSALGTDEPTARRRVAVVGTGYLGATHAAAMASLGFDVVGVDTDENKVRSLELG KVPFFEPGLAELLSAQVATGRLRFSTDAAAAAADADIHFICVGTPQQRGSHAADLRFVEAAARSIAENLTHDALIVGKST VPVGTAARLRALVAELAPAGVRAELVWNPEFLREGKAVDDTLHPDRIVVGGASPWAAGLLRELYAAPIAAGAPVVECDLP TAELVKVSANAFLATKISFINAIASVCEAAGADVTVLADALGHDPRIGRQFLDAGLGFGGGCLPKDIRALMHRARELGVH RAAGLLQEIDEINMAQRERVIEMATTACGGSVLNRRVGVLGAAFKPRTDDVRDSPALNVAAALHLRGAQVTVFDPEAADT ARRTFPTLSYASSAAEAVEGSDVVLLLTEWQEFLDADPAALAGLTPTPRMIDARGKLSPERMRAAGWEFAGLGRVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 1e-73 | 50 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 1e-73 | 50 |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 1e-73 | 50 |
