|
Name : Bcav_1120 (Bcav_1120) Accession : YP_002881142.1 Strain : Beutenbergia cavernae DSM 12333 Genome accession: NC_012669 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1258329 - 1260140 bp Length : 1812 bp Strand : + Note : PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnK DNA sequence : ATGACCGAGACCGTGGAGACGACCGCTGCGGCGACGACAGGCGAGCCGATCCTGTCGGTCCGGGGTCTCGACGTCGACTT CTTCGTCGACGGGGAGTGGCTCCCGGCGGCCATCGACGTGACGTACGACCTGCACCCCGGCGAGGTCCTCGCCATCGTCG GCGAGTCCGGCTCGGGCAAGACGCAGTCGTCGATGTCCCTGCTCGGGCTCCTCCCGCCGAACGGTCGCGCCCGGGGCAGC GCCACGCTCGGCGGTCGCGAGCTGATCGGGATGAGCACGCGCAACCTGCGCCGGGTGCGGGGCAAGGACATCTCCGTCAT CTTCCAGGAGCCGATGACGGCGCTGAACCCCGTCTACACGGTGGGCTTCCAGATCGTCGAGGCCCTGCGCGTCCACCAGA ACCTCGGCCCCGCGCGCGCCAAGGAGCGAGCGCTGGAGCTGCTGCGCCTGGTCGAGATCCCGGAGCCCGAGCGTCGCTTC GACTCGTACCCGCACCAGCTCTCCGGCGGGCAGCGGCAGCGCGCGATGATCGCGCAGTCGCTCGCCAACGACCCGACGCT GCTCGTCGCTGACGAGCCGACGACGGCGCTCGACGTCACCGTGCAGGCCGAGATCCTCAAGCTGATGCGCGACCTGCGCG GGCGGATCAACTCCGGCATCATCCTCATCACCCACGACATGGGCGTCGTCGCCGACATGGCGGACCGCATCGTCGTCATG AAGAACGGCCGCATCGTCGAGACGGGAACGGCTGCCGCGATCTTCGGCGCGCCGCAGCACCCGTACACGAAGCAGCTGCT CGACGCCGTGCCGCACCTCGGCACCCACTCGACGGAGCCGGCGCGGCGCGAGGAGCGTCGGGCAGAGCTCGAGGCGTTCA GCGCCGCCGAGCCCGTCATGGCGGCGACCGGGCTCGAGATCACGTACCCGAAGCGTGGGCGGAGCCCTGCGTTCCGGGCG GTCGACGGCGTCGACCTCACGATCGCACCCGGCGAGGTCGTCGGGCTCGTCGGCGAGTCGGGTTCGGGCAAGACCACGAT CGGCCGGGCGGTCGTCGGCCTCCTGCCCGTCAGCGGGGGCTCGCTGCGCATCGGCGGCGTCGACATGGTGGGGGCGACGG CGAAAGACCTGCGCCCGCTGCGGAGCCAGGTCGGCATCGTCTTTCAGGACCCGGGCAGCTCGCTCAACCCGCGGCTGCCG ATCGGGGAGTCCATCGGGGAACCGCTCATGCTGCACCGTGGCGTCAAGGGCGCGGAGCTGGCGCGGCACGTCGAGCGGCT CCTCGACCAGGTGGAGCTCCCGCGCTCGATGCGCAACCGCTACCCGCACGAGCTGTCCGGCGGGCAGCGGCAGCGCGTCG GCATCGCGCGTGCGCTGAGCCTCGAGCCGAAGCTGCTCGTCGCCGACGAGCCCACCTCGGCCCTGGACGTGTCGGTCCAG GCCCGCGTGCTCGAGCTGTTCCAGGACCTGCAGCGGGAGCACGGGTTCGCGTGCCTGTTCATCAGCCACGACCTCGCGGT GGTGGAGATGCTGGCGAGCCGGATCGCCGTCATGCACCACGGAAAGCTCGTCGAGATCGGCGCGACCGAACAGGTCGTGT CCAACCCGCAGGACCCGTACACGCAGCGCCTCATCGCCGCCGTCCCCGTTCCCGACCCGGACGAGCAGCGCAAGCGCCGC GAGATGCGGGACGCGCTGCTCGAGGCCGCGGCCGGCGACGAGGACGAGCACGCCTTGCAGTTCGAGCAGGAGCTGGTGCT CGAGCAGGTCGACGACCCGGGTGCGTCAGCCAAGACCGGTCCCGGACTCTGA Protein sequence : MTETVETTAAATTGEPILSVRGLDVDFFVDGEWLPAAIDVTYDLHPGEVLAIVGESGSGKTQSSMSLLGLLPPNGRARGS ATLGGRELIGMSTRNLRRVRGKDISVIFQEPMTALNPVYTVGFQIVEALRVHQNLGPARAKERALELLRLVEIPEPERRF DSYPHQLSGGQRQRAMIAQSLANDPTLLVADEPTTALDVTVQAEILKLMRDLRGRINSGIILITHDMGVVADMADRIVVM KNGRIVETGTAAAIFGAPQHPYTKQLLDAVPHLGTHSTEPARREERRAELEAFSAAEPVMAATGLEITYPKRGRSPAFRA VDGVDLTIAPGEVVGLVGESGSGKTTIGRAVVGLLPVSGGSLRIGGVDMVGATAKDLRPLRSQVGIVFQDPGSSLNPRLP IGESIGEPLMLHRGVKGAELARHVERLLDQVELPRSMRNRYPHELSGGQRQRVGIARALSLEPKLLVADEPTSALDVSVQ ARVLELFQDLQREHGFACLFISHDLAVVEMLASRIAVMHHGKLVEIGATEQVVSNPQDPYTQRLIAAVPVPDPDEQRKRR EMRDALLEAAAGDEDEHALQFEQELVLEQVDDPGASAKTGPGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-73 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-73 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 7e-73 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-73 | 41 |
