Gene Information

Name : VCD_001109 (VCD_001109)
Accession : YP_002876858.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 89215 - 89655 bp
Length : 441 bp
Strand : -
Note : catalyzes the endonucleolytic cleavage to 5'-phosphomonomer

DNA sequence :
ATGAGTTATTCAATTTACGTAGACGGCGCTGCACCAAACAACCAATACGGATGTACACGAGGTGGTATCGGGCTGGTGGT
CATGGATGAAGACAACGAGATTGTTCATGAAGAGAGCATCACCATCAATCGAAAAACCGACAATGCTGAGCTGGAACTAC
TGGCCTTAATTGAAGCATTGGAATACGCAGAAGATGGGGATGTTATCTATTCGGACAGCGATTACTGTGTGAAAGGTTTC
AACATCTGGATGGACGATTGGAAAGACCGAGGTTGGCGTCGAGCGGATAAGAAACCTGTTAAAAACCGCCAGCTTTGGCA
ACAAGTGGACGAGTTGAGTTCTAGGAAGTATGTCGAGGTATTTAAGGTCAAAGCACATTCGGGCATTGAAGGGAATGAAA
GAGCTGACCTGTTAGCGGTTGAAGCGGCGGAAGCTGACTAA

Protein sequence :
MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEALEYAEDGDVIYSDSDYCVKGF
NIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEVFKVKAHSGIEGNERADLLAVEAAEAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0498 NP_230152.1 ribonuclease H Not tested VSP-2 Protein 7e-48 100