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Name : xerD (VCD_001936) Accession : YP_002877675.1 Strain : Genome accession: NC_012668 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1000382 - 1001290 bp Length : 909 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : GTGAGCGAAGCCTTATCTCCCGACCAAGGGTTGGTGGAACAATTTTTAGATACCATGTGGTTTGAGCGCGGTTTGGCAGA AAATACCGTGGCGTCTTATCGTAATGACTTGAGTAAGCTATTAGAGTGGATGGCGCAGAACCAGTATCGGCTCGATTTTA TTAGCTTTGCTGGTTTGCAGGAGTATCAAAGCTGGCTGTCGGAGCAAAATTACAAACCGACCTCGAAAGCGCGCATGTTG TCGGCGATTCGTCGCCTGTTTCAATATCTGCATCGGGAAAAGGTGCGCGCTGATGATCCGAGTGCGCTGTTGGTGAGCCC GAAACTGCCAACGCGCTTACCAAAAGATTTGAGCGAAGCGCAAGTTGAAGCTTTGCTGAGTGCGCCAGATCCGCAAAGTC CACTTGAGCTGCGTGATAAAGCCATGCTGGAATTGCTGTATGCTACGGGACTGCGTGTGACAGAGCTGGTCTCACTGACC ATGGAAAACATGAGCTTGCGCCAAGGTGTGGTGCGAGTCATGGGTAAGGGTGGTAAAGAGCGTTTGGTGCCTATGGGTGA AAATGCCATTGAATGGATTGAAACTTTTTTGCAGCAGGGACGGTCTTTACTGCTAGGGGAGCAGACGTCGGATATCGTTT TCCCCAGTAGCCGCGGTCAGCAGATGACCCGGCAAACCTTCTGGCATCGCATTAAACACTATGCGGTTATTGCAGGAATT GATGTGGAAAAACTCTCGCCGCACGTATTGCGCCATGCGTTTGCCACTCACTTGCTCAATTATGGGGCCGATCTGCGCGT AGTGCAGATGTTGCTTGGGCATAGTGATTTATCGACCACACAAATTTATACTCATGTCGCCACTGAGCGGCTTAAACAAC TCCACAACGAGCACCATCCAAGGGCTTGA Protein sequence : MSEALSPDQGLVEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYRLDFISFAGLQEYQSWLSEQNYKPTSKARML SAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLSAPDPQSPLELRDKAMLELLYATGLRVTELVSLT MENMSLRQGVVRVMGKGGKERLVPMGENAIEWIETFLQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGI DVEKLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 7e-61 | 57 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 7e-61 | 57 |
