Gene Information

Name : VCD_001097 (VCD_001097)
Accession : YP_002876850.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 81293 - 81736 bp
Length : 444 bp
Strand : +
Note : -

DNA sequence :
ATGTCCAAATTAACCTTCACAGCATCATCACTACCTGTATCGAAGAAACTGCATAAGCTGTTAAGTGAGCAACTCACCGC
TCATTTGCTGAGTAGTGAAGCACTGACCACCAGCCGTTATCTGGTGTTTAACTTTCGCGATAAAAGTTACAGCGCGGATG
AAGGCGGCTTCCATCCGGTTGAGATGGCGATTTGCCAAACCTCAACAGGGGAATGGAGTATTGAGTACATCACCGACTTT
GCTTATATGGGGAATTACTATCCAGAGCTAGAGCGCAACTTGGATTTTGATTTTCGGGTTGGACAGTTCTTTGTGGCCTA
TCGTGGCTGGCTACCAATGCAAGGTAGCCGTGATGCCAAAGAGCTGTATCGCCTATGGGAGAGTAACTTTCTTGCCTATG
TTGATATGGACGCTTACAACGAGATAGCCATCACTGCGCAATAA

Protein sequence :
MSKLTFTASSLPVSKKLHKLLSEQLTAHLLSSEALTTSRYLVFNFRDKSYSADEGGFHPVEMAICQTSTGEWSIEYITDF
AYMGNYYPELERNLDFDFRVGQFFVAYRGWLPMQGSRDAKELYRLWESNFLAYVDMDAYNEIAITAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0508 NP_230159.1 hypothetical protein Not tested VSP-2 Protein 3e-64 100
VPI2_0036 ACA01851.1 hypothetical protein Not tested VPI-2 Protein 4e-42 59
VC1805 NP_231440.1 hypothetical protein Not tested VPI-2 Protein 4e-42 59
VC0395_A1402 YP_001217345.1 hypothetical protein Not tested VPI-2 Protein 4e-42 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_001097 YP_002876850.1 hypothetical protein VFG1138 Protein 1e-42 59