Gene Information

Name : VCD_001836 (VCD_001836)
Accession : YP_002877575.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : arabinose 5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 885129 - 886109 bp
Length : 981 bp
Strand : -
Note : -

DNA sequence :
ATGAGGATGCCCCATTCATTTGATTACCAAACGGTCGCTAAACAAGTGCTAGCAACCGAAATCCATGCATTGCAACAGCT
AGAGCAGTATATCAATGACGATTTTGCGCGTGCTTGTGCGATGATTTTGGCCAATCAAACGGGCAAAGTCGTGGTGATGG
GGATGGGCAAATCAGGCCATATTGGTAAGAAAATTGCCGCCACCTTAGCCAGTACAGGAACGTCTGCCTTTTTTGTACAT
CCGGGTGAAGCTTCACATGGGGATCTCGGAATGATTGAACGTGGCGATATCGTACTCGCCATCTCTAATTCCGGAGAATC
ATCAGAAATCCTCGCCCTGCTTCCCGTGCTCAAGCGCTTGAGTATTCGCGTGATCAGCATGACAGGCAACCCCAACTCCA
ATATGGCGAAATTGGCCGATATCCATCTGCAAATCACCGTACCGCGTGAAGCTTGCCCGTTAGAGCTTGCGCCAACCTCA
AGCACCACCGCCACTCTCGTAATGGGCGATGCGTTGGCGGTGGCTCTGATGCAGGCACGCGGTTTCACCGCAGAAGATTT
TGCTTTGTCTCACCCAGGTGGCGCACTTGGGCGTAAACTCTTGCTCAAACTCAATGACATCATGCACAGTGGTGACGCAC
TGCCTAAAGTGGCACCACAAGCCTTGATCCGAGATGCTTTGCTCGAAATCAGTCAAAAAGGGCTTGGCATGACAGCCATT
GTCGATGAACAAGACACACTACTCGGTATTTTTACTGACGGTGATTTACGGCGCATTCTTGATAAACGCATCGATATTCA
CAGCACTGTGATTGCCGATGTGATGACGCGCCAACCAACCGTTGCTCAGCCCAATTTGCTGGCCGTGGAAGGATTGAATT
TAATGCAGGCCAAACGCATTAATGGCCTGATGCTCGTTGAAAATAATAAATTGGTCGGTGCACTGAACATGCACGATCTA
CTCAAAGCCGGAGTGATGTAA

Protein sequence :
MRMPHSFDYQTVAKQVLATEIHALQQLEQYINDDFARACAMILANQTGKVVVMGMGKSGHIGKKIAATLASTGTSAFFVH
PGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMTGNPNSNMAKLADIHLQITVPREACPLELAPTS
STTATLVMGDALAVALMQARGFTAEDFALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAI
VDEQDTLLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLVENNKLVGALNMHDL
LKAGVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 1e-43 41
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 8e-44 41
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 2e-43 41