Gene Information

Name : hemC (VCD_001580)
Accession : YP_002877319.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 625092 - 626045 bp
Length : 954 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGGATAGGAACATCATAATGACCGAGACGCCGATTCGCATTGCAACCCGCCAGAGTCCACTGGCTTTGTGGCAAGCCAA
CTATGTTAAAGACGCCTTAATGGCAGCCCACCCCGGACTGCAGGTGGAGTTGGTGACTATGGTCACGCGCGGCGATGTGA
TTCTGGATACTCCACTGGCTAAAGTGGGCGGTAAAGGCTTATTCGTGAAAGAGCTGGAAATTGCCATGCTCGAAGGGCGC
GCCGATTTAGCCGTGCATTCAATGAAAGATGTTCCGGTCGATTTCCCTGACGGTCTGGGCTTAGTCACCATCTGCGAACG
GGAAGATCCGCGTGATGCGTTTGTCTCAAATACCTACGCCAAGATTGAAGATCTGCCCTCGGGCGCTATCGTCGGTACCT
GCAGTTTACGCCGTCAATGCCAACTCAAAGCGGCACGGCCAGATTTAGTGATTAAAGAGCTGCGCGGCAACGTGGGGACT
CGCCTAAGTAAGCTTGATGCGGGCGAATACGATGCCATCATTTTAGCGGCAGCAGGCCTAAAACGCCTTGAGCTCGAAAG
CCGTATTCGTAGCTTTATTGAACCGGAACAGTCCCTACCTGCAGTTGGCCAAGGTGCCGTTGGTATTGAATGTCGCGTGA
ATGATCAACGCGTGCGCGCCCTACTCGCACCTCTTAACCATGCTGATACCGCCGATCGAGTGCGCTGCGAACGCGCGATG
AATCTCACGTTACAAGGTGGCTGTCAGGTGCCGATTGGTAGCTATGCACTGCTGGAGGGTGACACTATTTGGCTACGCGC
TCTTGTGGGTGAACCCGATGGTTCGCAAATCGTGCGCGGCGAAATTCGCGGACCTCGCACACAAGCTGAGCAACTTGGCA
TCACGCTGGCTGAGCAACTGCTTAGCCAAGGAGCCAAAGAGATCTTGGAGCGTCTCTACTGTGACCACGAATAA

Protein sequence :
MDRNIIMTETPIRIATRQSPLALWQANYVKDALMAAHPGLQVELVTMVTRGDVILDTPLAKVGGKGLFVKELEIAMLEGR
ADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVGTCSLRRQCQLKAARPDLVIKELRGNVGT
RLSKLDAGEYDAIILAAAGLKRLELESRIRSFIEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAM
NLTLQGGCQVPIGSYALLEGDTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQGAKEILERLYCDHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-85 62
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-85 62