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Name : VCD_001070 (VCD_001070) Accession : YP_002876823.1 Strain : Genome accession: NC_012668 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 51867 - 54506 bp Length : 2640 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGAAATGCCGCAAGGCCTGCACAGATGATGATAAGCAGCGACATAAGATTATGATGAAATCGAACGCCTCACCGAGCGA GTCTCTTTCGCACCACACCCCGATGATGCAACAGTATTTAAGACTCAAGGCGGAAAACCCAGACATTCTGCTGTTCTATC GCATGGGTGATTTTTACGAACTGTTTTATGACGATGCCAAACGCGCCTCTGAACTGCTAGATATTTCCTTAACCAAACGC GGCGCATCGGCGGGTGAACCCATTCCTATGGCGGGTGTGCCTTTCCATGCCGTGGAAGGTTATTTGGCGAAACTCGTCCA GATGGGGGAATCGGTCGCGATCTGCGAACAGATTGGCGATCCAGCCACCAGCAAAGGCCCCGTTGAGCGCAAAGTAGTGC GGATTGTGACACCGGGAACGGTGACCGATGAAGCCCTGCTCTCAGAGCGAGTCGATAACCTGATCGCGGCGATTTATCAC CATAACGGCCGCTTTGGTTATGCAACCATGGATATCACCTCCGGTCGTTTTCAGCTCAGTGAGCCGCAAACCGAAGAAGA GATGGCCGCCGAGCTGCAACGCACTTCGCCTCGTGAACTCTTGTTTCCTGAAGATTTTTCGCCAGTGCATCTAATGGCAA GCCGCCAAGGCAACCGCCGTCGCCCGATTTGGGAATTTGAACTCGATACCGCGAAACAGCAGCTCAACCAGCAATTTGGC ACGCGCGATCTGGTTGGCTTTGGGGTTGAGCAAGCAAAACTTGGCTTGTGCGCAGCAGGCTGCTTGATCCAATACGTCAA AGATACTCAGCGTACCGCTTTGCCACACATTCGTTCACTGACTTGGGATCGCCAAGATCAATCGGTGATTTTGGATGCCG CGACGCGGCGCAACCTTGAACTCACTCATAACTTGGCGGGTGGAACAGATAACACGCTTGCAGAAGTACTCGACCATTGT GCTACCCCCATGGGCAGCCGCATGCTCAAACGTTGGATCCACCAACCGATGCGCGATAACGCCACTCTCAATCAGCGTTT AGATGCGATCACTGAGCTCAAAGAAACCGCTTTGTATGGGGAACTGCATCCCGTGCTCAAACAGATTGGCGATATTGAAC GGATCCTCGCCCGTCTAGCGCTGCGTTCAGCGCGGCCGCGCGATTTAGCTCGCCTACGCCATGCCATGCAGCAGTTACCT GAATTGCACTCGGTCATGAGCGAGCTTAAGCAGCCTCACCTTACCGAGCTACGCACCCATGCCGAGCCAATGGATGAATT GTGCGATTTACTCGAACGTGCGATCAAAGAAAACCCACCCGTGGTGATCCGCGATGGTGGCGTGATCGCCGATGGTTACA GTGCCGAACTCGATGAATGGCGCGATTTAGCCAATGGCGCAACCGAATTTCTGGAACGCTTGGAAGCCGAAGAGCGCGAT CGTCACGGCATTGATACCCTGAAAGTGGGTTATAACAATGTGCACGGTTTCTACATTCAAGTGAGCCGGGGTCAGAGCCA TTTAGTGCCTCCCCACTATGTACGCCGTCAAACCTTAAAAAATGCTGAGCGTTACATCATCGAAGAACTTAAACAGCATG AAGATAAAGTGCTCAATTCTAAGTCTCGTGCTTTAGCGTTAGAAAAACAGCTGTGGGAAGAGTTGTTCGATTTGCTGATG CCGCATCTTGAGCAGCTGCAACAACTGGCGGCTTCCGTTGCTCAATTGGATGTGCTGCAAAACCTCGCAGAGCGCGCAGA AAACTTGGAATATTGTCGCCCAACGCTGGTTCAAGAAGCGGGCATTCACATCCAAGGTGGTCGCCACCCTGTGGTAGAGC GAGTAATGAATGAGCCGTTTATCGCCAACCCGATCGAACTTAATCCACAGCGACGCATGCTGATCATTACTGGTCCGAAT ATGGGCGGTAAATCGACTTACATGCGTCAAACCGCCTTGATTGCACTGATGGCGCATATCGGTAGTTATGTGCCGGCTGA AAGTGCGTCAATCGGCCCACTAGATCGTATTTTTACCCGTATCGGCGCGTCCGATGATCTTGCGTCCGGCCGCTCAACCT TTATGGTGGAGATGACGGAAACCGCCAATATTTTGCACAATGCGACCCGTAACAGTTTGGTGTTGATGGATGAGATTGGC CGCGGTACCAGTACTTATGACGGACTCTCGCTCGCTTGGGCGAGTGCCGAGTGGCTTGCCAAAGAGATTGGTGCCATGAC GCTGTTTGCTACTCACTATTTTGAGTTAACCGAACTGCCGAATGTGTTACCTCATCTAGCGAATGTTCATTTAGATGCGG TTGAACATGGTGATGGCATCGCCTTTATGCACGCAGTGCAAGAGGGTGCCGCGAGTAAATCGTATGGTTTAGCCGTAGCA GGACTGGCTGGCGTACCCAAGCCCGTGATTAAAAATGCGCGCGCCAAATTACAACAACTTGAGCTATTAAGCTCACAACC TGCCGAGACTCGTAAGCCAAGCCGCGTCGATATTGCCAACCAGCTGAGCTTAATTCCTGAGCCGAGTGCTGTTGAGCAAG CCTTGGCAGGCGTAGATCCTGACCAGCTCACTCCTCGCCAAGCTCTAGATATGCTCTATCAATTGAAAAAGCTGCTCTAG Protein sequence : MKCRKACTDDDKQRHKIMMKSNASPSESLSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLTKR GASAGEPIPMAGVPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEALLSERVDNLIAAIYH HNGRFGYATMDITSGRFQLSEPQTEEEMAAELQRTSPRELLFPEDFSPVHLMASRQGNRRRPIWEFELDTAKQQLNQQFG TRDLVGFGVEQAKLGLCAAGCLIQYVKDTQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVLDHC ATPMGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILARLALRSARPRDLARLRHAMQQLP ELHSVMSELKQPHLTELRTHAEPMDELCDLLERAIKENPPVVIRDGGVIADGYSAELDEWRDLANGATEFLERLEAEERD RHGIDTLKVGYNNVHGFYIQVSRGQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDLLM PHLEQLQQLAASVAQLDVLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVERVMNEPFIANPIELNPQRRMLIITGPN MGGKSTYMRQTALIALMAHIGSYVPAESASIGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIG RGTSTYDGLSLAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLAVA GLAGVPKPVIKNARAKLQQLELLSSQPAETRKPSRVDIANQLSLIPEPSAVEQALAGVDPDQLTPRQALDMLYQLKKLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VCD_001070 | YP_002876823.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 72 |
