Gene Information

Name : rdgC (VCD_003606)
Accession : YP_002879332.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 2891781 - 2892695 bp
Length : 915 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAAAACTGTATGGTGTATCGCGTTAATCGCGAGGTTAACTTCAATGCCGATCAGCTGGAAAAACAGCTGGC
CGAATTTCGTTTTACGCCTTGCGGCAGTCAAGATAAACAGAAGTTTGGCTGGGTTTCCGCACTGGGTAAACACGGCGACA
TGATGACCCACGTCAGTGAAAACCGCATTTTAGTCTGCGCGAAACGTGAAGAAAAAATGCTCCCCGCTTCGGTGATCAAA
GATTCGCTCAATGCCAAAGTCGAAGAGATGGAAGCCGAAGAAGGCCGCCCACTGAAGAAAAAAGAAAAAGACGCGCTGAA
AGAAGACATCGTCATCGATTTACTGCCACGCGCCTTCAGCAAAAGCCAACTCACGTTTGTGCTGATCATGCCAACCGAAG
GCTTAATTCTAGTCGATGCAGGCAGCTACAAAAAAGCCGAAGATGTGCTCTCGCTACTGCGTAAAACCATGGGTAGTCTA
CCGGTGGTGCCTGCTATTCCTGAAATAGCGGTCGAAACGACGCTGACGCAATGGGTGAAAGATGGCAATCTGCCCCAAGG
CTTTAGCCTGATGGAAGAAGCGGAGCTCAAATCGTTACTCGATGATGGAGCCACCATTCGCTGCAAAAAACAAGAGCTGA
GCAGCGATGAAATCCTGAGCCACATTCAAGCCAATAAAGTGGTCACCAAGCTGGCGATCAACTGGCAAGACCGAATTCGT
TTTGTCCTCGCGGAAGATTGCAGCATCAAGCGCCTAGCGTACAGCGATGAACTTAAAGAGCAGAATGATGACATCCCACA
CGAAGATCGCGCAGCCCGTCTTGATGCCGATTTCTCCCTGTTGTGCGGAGAAATGTCGGTTTTCCTGCCGGATCTATTCA
ATGCATTAGGTGGCCTGCCTCACCCTGAAGCCTAA

Protein sequence :
MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKHGDMMTHVSENRILVCAKREEKMLPASVIK
DSLNAKVEEMEAEEGRPLKKKEKDALKEDIVIDLLPRAFSKSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSL
PVVPAIPEIAVETTLTQWVKDGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRIR
FVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGGLPHPEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 6e-70 52