Gene Information

Name : VCD_003505 (VCD_003505)
Accession : YP_002879233.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2778141 - 2779079 bp
Length : 939 bp
Strand : -
Note : zinc metalloprotease

DNA sequence : 
ATGAGAAAATCGATATTGATTAGCTTGTGCCTTTTTTCTAGCATTACAAATGCCTGTCCAATTGGTGATATTCTAGAGTC
TATGGAATTACCATTAGAAATTGAAACATCCCATGAGTTGCGCGCAGAATTGGCTAAGCTAACTGGTGGAACTTATTATA
GAGATTATTTATATCGATTGATTGATGAATTAAACCCATTTTTTAAAACTGACCAGATGCTAACAGCAGAGCATACCTAC
TGGGCAAAACAATTGCTTGATTCTGGAAAGCTTAAAAATTTTACAAGTGCACTTAGTTATGTGAAAATAAACAGAAACTC
TATGATACCAGAGTTTGAAGGTAGATATCTTGTTGCAAAAGAACTCTCAAAATTAGACCCAGCGCTTTTAAAATCAGGAT
GGAATACGGTTCATGAAATAAAGCTTGTAGTAACACATGATAATGTCACTACTTATTGGGAACATTTAAAAGGACAGCCT
GTTCGCGGACATGAAGCTGGCATAACGTGGGATTCTATTCCAGGAGCAGGATCACCAGAAGGTTTAACAGAATTAGTGAT
TGCTCTTCAAAAAAATCCGGATGGTAAATGGGCTATACCAACAGGTAATCATGGTTCGAAAAATCTAGTTATTCATGAGT
TTGGTCATACTCTAGATCGTGTAGTGGGTACATATTTTACTGGTAAGCCCTACAGTCAAAATCCGAGTTTTTATCAAGCT
TGGCATAGTGATTATCAACTAGGGAAGATAAAAGAACACTACTTCTTACAACCTGAGAATAACTATGCTGTTGCATTAGA
GGAGTCATTTGCTGAAGGGTTATCGAAACTTTATGGGATTGATAATATACAATCTACTTATGACTGGCCCTATATGTCCG
CTTATTTCTATGACCAGTTTAAAAAATCAATACAAGAACAAAATCAGGGTTATAAGTAA

Protein sequence : 
MRKSILISLCLFSSITNACPIGDILESMELPLEIETSHELRAELAKLTGGTYYRDYLYRLIDELNPFFKTDQMLTAEHTY
WAKQLLDSGKLKNFTSALSYVKINRNSMIPEFEGRYLVAKELSKLDPALLKSGWNTVHEIKLVVTHDNVTTYWEHLKGQP
VRGHEAGITWDSIPGAGSPEGLTELVIALQKNPDGKWAIPTGNHGSKNLVIHEFGHTLDRVVGTYFTGKPYSQNPSFYQA
WHSDYQLGKIKEHYFLQPENNYAVALEESFAEGLSKLYGIDNIQSTYDWPYMSAYFYDQFKKSIQEQNQGYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0823 NP_230471.1 hypothetical protein Not tested VPI-1 Protein 2e-137 100
unnamed AAK20780.1 putative zinc metalloprotease Not tested VPI Protein 1e-137 100
VC0395_A0348 YP_001216304.1 hypothetical protein Not tested VPI-1 Protein 5e-136 99
unnamed AAK20750.1 putative zinc metalloprotease Not tested VPI Protein 4e-136 99
unnamed AAC12277.1 putative zinc metalloprotease Not tested VPI Protein 8e-137 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_003505 YP_002879233.1 hypothetical protein VFG0086 Protein 8e-138 100