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Name : VCD_003497 (VCD_003497) Accession : YP_002879225.1 Strain : Genome accession: NC_012668 Putative virulence/resistance : Virulence Product : toxin co-regulated pilus biosynthesis protein C Function : - COG functional category : - COG ID : - EC number : - Position : 2769385 - 2770854 bp Length : 1470 bp Strand : - Note : - DNA sequence : ATGAAAAAAACAATAATCAGTACACTTGTTATCGGTTTGGTTTCCGGTTGTTCTAATACGAACTTGCTAAAAGACAATCT GGCTAGCGAGCAAAGTGTTATCAATTTGAGTAAGTCTTCAAACGAAGCGAAATCTAGAAATATTGAATTTCTCTCTGGTG CCTATTTAAGTGAGAGAAAAGTGCCAAAGCATGACATTAAGTTCAGTGGTAAGTATGTTGAGTTTGAAAGTAAATCACCG ATAGAGTTAATCGATGTTCTTGATGGACTTTCTAAGCAATATAATATTCAGTATGTATTCTCAGATGAGTTAGAAGATGA AAATTCAGAAGAAAATAAAAAGTCATCAGGCTCATCATCGGCGAAGAAAATAAAATACTCAGGTCCTCTGGCTGGTTTTT TTGATTATTTAAGTAGTGCATATAACATGCACTTTGAATTTGGTCATAATAACTTAGTTAAGGCATATCATTATAAAAAT CAAGTTTTTAACCTCCAGCAATACTTTGATGATAATAAGTTTAGCTCATCAATGCAGATCGGCGGTACCAGTGGCACATC AAGTGGTTTAAAAGGTACTGCAGATACGGCTATAGAATCTAATAGTTGGGAAAAAATCGATGAGTTTTTAAGTGCATCGT TAGGTGAAACTGGAAAATTTACTATTTTTGAAGATTATTCACTAGTTACAGTAAAAGCTCGACCAGATAAGTTTTTATTG TTACATACTTTCTTTGATAAGTTAATCAATGAGAGCAAGATGCAAATCGCGGTTGATTATAGAGTGGTATCTCTTAGTGA AGAACGCTTAAATCAGTTAGCTGCCAAATTTGGTATTGAAAATGCAGGGAAATACAGTATTACCAGTGATATGGTCGATG CGATCTCTTTAAGTCAAGTAGGGGGGGGGTTAGGCGCTTCATATCGCTCCGCCTCAGCAAGATTAGATGCAGTGGTTAAT GAGTTATCACAGGAAGTAATGCATGAGGGGCATTTTATCGGTATCCCTAACAGAGTAATGCCACTAAATGTCACTACAAA CTCGAAGTATATATCCTCAATCGAAACAACAAAAGATACCAATACTGATGAGGAAACGAGAACTGTCAAAGTTTCTGACT TAGTAACTGGTTTTAGCATGATGGTTATGCCGAAAATCTTAGATGATGGACGAATTCAAATATCGTCTGGCTTTTCAAGA AAACAGTTAGTGTCTATTGGTACTGCACAAGGTATTACTCTACCAACAGTTGATGAAAATGAATCAATGAATACAGTAAC GATGAACCCTGGTGAAGTACGCCTAGCAATGCTATTTAAGGATAACTACATTCAGAATAGTAATGGTGTTCAATTATTAG GTGGTGGTACTGAAAATAAGAAATCGGCTCGTTATATTGCTGTGCTTGTTGGTGCAAGCAGTTACAAAACCAATGATCTG GCTAGTAATAGAGTAAATATATATGACTAG Protein sequence : MKKTIISTLVIGLVSGCSNTNLLKDNLASEQSVINLSKSSNEAKSRNIEFLSGAYLSERKVPKHDIKFSGKYVEFESKSP IELIDVLDGLSKQYNIQYVFSDELEDENSEENKKSSGSSSAKKIKYSGPLAGFFDYLSSAYNMHFEFGHNNLVKAYHYKN QVFNLQQYFDDNKFSSSMQIGGTSGTSSGLKGTADTAIESNSWEKIDEFLSASLGETGKFTIFEDYSLVTVKARPDKFLL LHTFFDKLINESKMQIAVDYRVVSLSEERLNQLAAKFGIENAGKYSITSDMVDAISLSQVGGGLGASYRSASARLDAVVN ELSQEVMHEGHFIGIPNRVMPLNVTTNSKYISSIETTKDTNTDEETRTVKVSDLVTGFSMMVMPKILDDGRIQISSGFSR KQLVSIGTAQGITLPTVDENESMNTVTMNPGEVRLAMLFKDNYIQNSNGVQLLGGGTENKKSARYIAVLVGASSYKTNDL ASNRVNIYD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcpC | AAK20788.1 | toxin-coregulated pilus biosynthesis outer membrane protein C (lipoprotein) | Virulence | VPI | Protein | 0.0 | 100 |
| VC0831 | NP_230479.1 | toxin co-regulated pilus biosynthesis outer membrane protein C | Virulence | VPI-1 | Protein | 0.0 | 100 |
| tcpC | YP_001216312.1 | toxin co-regulated pilus biosynthesis outer membrane protein C | Virulence | VPI-1 | Protein | 0.0 | 99 |
| tcpC (lipoprotein) | CAA45458.1 | - | Virulence | VPI | Protein | 0.0 | 99 |
| tcpC | AAK20758.1 | toxin-coregulated pilus biosynthesis outer membrane protein C (lipoprotein) | Virulence | VPI | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VCD_003497 | YP_002879225.1 | toxin co-regulated pilus biosynthesis protein C | VFG0094 | Protein | 0.0 | 100 |
