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Name : VCD_003491 (VCD_003491) Accession : YP_002879219.1 Strain : Genome accession: NC_012668 Putative virulence/resistance : Virulence Product : toxin co-regulated pilus biosynthesis protein F Function : - COG functional category : - COG ID : - EC number : - Position : 2764115 - 2765131 bp Length : 1017 bp Strand : - Note : outer membrane channel for TcpA extrusion DNA sequence : ATGAGATATAAAAAAACCTTAATGTTATCAATCATGATTACATCATTTAACTCATTTGCATTTAATGATAATTATAGTTC AACCAGTACGGTTTATGCTACGTCTAATGAAGCTACGGATTCAAGGGGGAGTGAGCACCTTAGATACCCTTATTTAGAGT GTATCAAAATCGGTATGAGTAGAGATTATCTTGAAAACTGTGTGAAAGTATCTTTTCCAACCTCTCAAGATATGTTTTAT GACGCATACCCATCGACAGAATCTGACGGTGCTAAGACAAGAACAAAAGAAGATTTCTCTGCTCGGCTTTTAGCTGGTGA TTATGATAGTTTACAGAAATTGTATATAGATTTTTATCTTGCTCAAACGACTTTCGATTGGGAAATACCGACAAGGGATC AAATTGAGACACTAGTTAATTATGCTAATGAAGGTAAATTGTCTACGGCACTTAATCAAGAGTATATTACAGGTCGATTT CTTACAAAAGAAAATGGTCGATATGATATTGTGAATGTTGGTGGTGTTCCAGATAATACTCCAGTTAAACTACCAGCTAT TGTTTCTAAACGCGGACTAATGGGTACAACTTCTGTAGTTAATGCAATTCCCAATGAAATTTATCCTCATATCAAAGTTT ATGAAGGGACTCTTAGTCGTTTAAAACCTGGTGGTGCAATGATCGCAGTATTAGAATATGACGTAAGTGAATTAAGTAAG CACGGGTATACCAATCTGTGGGATGTGCAGTTTAAGGTTCTTGTTGGAGTTCCACATGCAGAAACAGGAGTTATCTATGA CCCTGTTTATGAAGAAACTGTCAAACCATATCAGCCTAGTGGCAACTTAACGGGTAAGAAGTTGTATAATGTATCTACAA ATGACATGCATAATGGTTACAAGTGGTCAAATACTATGTTCTCAAATTCTAATTATAAAACGCAAATATTATTAACTAAA GGAGATGGAAGTGGTGTGAAACTGTATAGCAAAGCATATTCAGAGAACTTTAAATAA Protein sequence : MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMSRDYLENCVKVSFPTSQDMFY DAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYLAQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRF LTKENGRYDIVNVGGVPDNTPVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGYKWSNTMFSNSNYKTQILLTK GDGSGVKLYSKAYSENFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0837 | NP_230485.1 | toxin co-regulated pilus biosynthesis protein F | Virulence | VPI-1 | Protein | 7e-156 | 100 |
| tcpF | AAK20794.1 | toxin-coregulated pilus biosynthesis protein F | Virulence | VPI | Protein | 5e-156 | 100 |
| tcpF | YP_001216318.1 | toxin co-regulated pilus biosynthesis protein F | Virulence | VPI-1 | Protein | 2e-155 | 99 |
| tcpF | CAA45464.1 | - | Virulence | VPI | Protein | 8e-155 | 99 |
| tcpF | AAK20764.1 | toxin-coregulated pilus biosynthesis protein F | Virulence | VPI | Protein | 1e-155 | 99 |
| tcpF | AAG31796.1 | toxin co-regulated pilus biosynthesis protein F | Virulence | VPI | Protein | 2e-121 | 72 |
| tcpF | AAG31789.1 | toxin co-regulated pilus biosynthesis protein F | Virulence | VPI | Protein | 4e-111 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VCD_003491 | YP_002879219.1 | toxin co-regulated pilus biosynthesis protein F | VFG0100 | Protein | 3e-156 | 100 |
