Gene Information

Name : VCD_003489 (VCD_003489)
Accession : YP_002879217.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : TCP pilin signal peptidase TcpA processing
Function : -
COG functional category : N : Cell motility
COG ID : COG1989
EC number : -
Position : 2762317 - 2763078 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence : 
ATGGAATACGTTTACTTGATCCTATTTTCGATTGTATCACTGATTTTGGGTAGTTTTAGTAATGTTGTGATTTATCGTCT
ACCAAGAAAAATTTTACTAAAGAATCATTTTTTTTATGACATCGATTCAAATCGTTCCATGTGCCCTAAATGTGGAAATA
AAATCAGTTGGTATGATAATGTTCCATTGTTAAGTTATTTGTTACTTCATGGTAAGTGTAGACATTGTGATGAAAAAATT
TCATTAAGTTATTTTATTGTCGAATTATCATTTTTTATAATCGCATTTCCAATATATTGGTTATCAACTGACTGGGTTGA
TTCGTTCGTATTGCTCGGGCTTTACTTTATTTTATTCAATCTTTTTGTAATTGATTTTAAATCTATGCTATTGCCAAATT
TACTTACGTATCCGATATTCATGTTGGCATTTATTTATGTGCAGCAAAATCCAGCATTAACAGTTGAAAGCTCTATTATT
GGTGGTTTTGCGGCTTTCATCATATCCTATGTGAGTAATTTCATTGTTCGGTTATTCAAAAGAATCGATGTGATGGGAGG
TGGAGATATAAAGCTCTATACTGCGATTGGTACTCTTATCGGTGTTGAGTTTGTACCATATTTATTCTTGCTGTCCTCGA
TTATTGCATTTATTCATTGGTTCTTTGCTAGAGTCTCATGTCGGTATTGCTTATATATCCCTCTTGGACCAAGCATTATT
ATCTCTTTTGTAATTGTTTTTTTTTCAATCCGTTTAATGTGA

Protein sequence : 
MEYVYLILFSIVSLILGSFSNVVIYRLPRKILLKNHFFYDIDSNRSMCPKCGNKISWYDNVPLLSYLLLHGKCRHCDEKI
SLSYFIVELSFFIIAFPIYWLSTDWVDSFVLLGLYFILFNLFVIDFKSMLLPNLLTYPIFMLAFIYVQQNPALTVESSII
GGFAAFIISYVSNFIVRLFKRIDVMGGGDIKLYTAIGTLIGVEFVPYLFLLSSIIAFIHWFFARVSCRYCLYIPLGPSII
ISFVIVFFSIRLM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0839 NP_230487.1 leader peptidase TcpJ Virulence VPI-1 Protein 2e-108 100
tcpJ YP_001216320.1 leader peptidase TcpJ Virulence VPI-1 Protein 2e-108 100
tcpJ AAK20766.1 leader peptidase TcpJ Virulence VPI Protein 2e-108 100
tcpJ AAK20796.1 leader peptidase TcpJ Virulence VPI Protein 2e-108 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_003489 YP_002879217.1 TCP pilin signal peptidase TcpA processing VFG0102 Protein 1e-108 100