Gene Information

Name : VCD_003485 (VCD_003485)
Accession : YP_002879213.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : accessory colonization factor AcfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2757598 - 2758245 bp
Length : 648 bp
Strand : +
Note : -

DNA sequence : 
ATGCAAAAAACTTTATCAGCAATTTTTTTGTTTACGACTTTATCAGCAAATGCAGCACCGTATATTGGTCTTGAACTTGG
AATTGGAACAGCAAATCATAGCTTTGAGACGAACTATCAAAGTGACGCTGTTAGCCTAAACCCCAATATGGAAGATATGT
TTTTAGGTGGACTAATTGGTTATAAATTTAATGATAATTTTTCTTTTGAAATCAACTATTCAAGTTATAAATTAGAAGAT
CAATACAGTAAGTTTATAGGAATTGAATCTTTAAATAATCAACAATATAGAAAAGAGCACGAATGGAGCTCTGAGATTGA
AGCTAAACAACTTGCATTAATCTCAGTTTACTCATACCCCATTCATCAGCAATTGAAAACAAATATAAAAGTTGGTGTGA
CACATACACAATATGAAGCATATTCTGGAAAATATGAAGAGCTAGAATTACTCCTAAATGATGATATAGAGATTAGAAAA
GCTCTATTAGAAACAGGTCTTAAAAAGAATCGCTTTGGTGCACTATTTTCGTTAGGGTTGGATTATAATTTAATTCCAGA
GCTTAGCGTTGGAACAGAGTTAAGATATCAGTTCGATAAGTACAATGATGTGCTTTCTATAAGTTTAAATTCAAAGTACT
ACTTCTAG

Protein sequence : 
MQKTLSAIFLFTTLSANAAPYIGLELGIGTANHSFETNYQSDAVSLNPNMEDMFLGGLIGYKFNDNFSFEINYSSYKLED
QYSKFIGIESLNNQQYRKEHEWSSEIEAKQLALISVYSYPIHQQLKTNIKVGVTHTQYEAYSGKYEELELLLNDDIEIRK
ALLETGLKKNRFGALFSLGLDYNLIPELSVGTELRYQFDKYNDVLSISLNSKYYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfA ACK75651.1 accessory colonization factor AcfA Virulence VPI Protein 4e-90 100
acfA YP_001216324.1 accessory colonization factor AcfA Virulence VPI-1 Protein 5e-90 100
acfA ACK75654.1 accessory colonization factor AcfA Virulence VPI Protein 4e-90 100
acfA ACK75663.1 accessory colonization factor AcfA Virulence VPI Protein 4e-90 100
acfA ACK75669.1 accessory colonization factor AcfA Virulence VPI Protein 4e-90 100
acfA AAA69687.1 accessory colonization factor Virulence VPI Protein 4e-90 100
acfA AAA82709.1 AcfA Virulence VPI Protein 4e-90 100
acfA AAK20771.1 accessory colonization factor AcfA Virulence VPI Protein 4e-90 100
acfA AAK20801.1 accessory colonization factor AcfA Virulence VPI Protein 4e-90 100
VC0844 NP_230492.1 accessory colonization factor AcfA Virulence VPI-1 Protein 5e-90 100
acfA ACK75648.1 accessory colonization factor AcfA Virulence VPI Protein 6e-90 99
acfA ACK75645.1 accessory colonization factor AcfA Virulence VPI Protein 4e-90 99
acfA ACK75660.1 accessory colonization factor AcfA Virulence VPI Protein 4e-88 97
acfA ACK75657.1 accessory colonization factor AcfA Virulence VPI Protein 3e-87 96
acfA ACK75666.1 accessory colonization factor AcfA Virulence VPI Protein 3e-87 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_003485 YP_002879213.1 accessory colonization factor AcfA VFG0103 Protein 2e-90 100