|
Name : VCD_002895 (VCD_002895) Accession : YP_002878625.1 Strain : Genome accession: NC_012668 Putative virulence/resistance : Virulence Product : autotransporter adhesin Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG2931 EC number : - Position : 2080286 - 2088178 bp Length : 7893 bp Strand : - Note : - DNA sequence : ATGACTTCTATGTTCTCTGAAACAAATAGCAAGAGCATTGTTGTTCCTACCAAAGTCTCGCCTGAACCAGAGCGCCAAGA AGTGACTCGTAGAGACGTCCGTATCTCAGGGGTGAACCTCGAAAGTCTAAGTGCGGTACAGGGAAGTCAACCAACGGGTC AACTGGCTTCGAAAAGTGTCCCCGGATTTAAAAGCCATTTCGCATCGACATCCATTGGTATAGAAAATGAGTTATCCGGT CTGGTGGTGGTTTTACCGAAAAACTCAGCGCAGACTTTTGGCTATGTGCATGATTCACAAGGTAACCCATTGTTCATGCT AACCAAGGATATGAATCAAGGTGGTTATAGCAACCCAGTGGGTATCAATGATATTCAAGGGGTGAACAACTGGCAGACGC ATACGATTGAACTGGTTACATATCCTAGTGAAATCAGTGATACAGCAGCGGTTGAAAGTCGTAAAGAGGCAATGCTATGG CTTGCGAAAGAGTTTACCGATCATATCAATCAGTCTAACCACCAAAGCTTACCTCATTTAGTGAGTGATGACGGTCGTTT CACTCTGGTTATATCGAACTCTAAGCATCTTATTGCGGCGGGTAACGGAACCTCTATTGATGCACAAGGCAAGACCATAG GAATGACCCCTAGTGGCCAACAAGCAACAATGGCGATCAGTGCGAAAGAATTTGGTACAAGCTCGTCGCCGGAAGTCAGA CTGCTTGAATCTGCGCCTTGGTATCAAGCAGGGTTGAGAGATGAGTTTTTAGCAAACGCGAAAAACACCACGTTGGATGA TCCCGCTACAGCACAAAATGTGTATGCCTATCTCACGTCTGTCTATTCAAAAACAGCAGATTTGGCCAAAGAGTATGGGA TCTACATCAATGATTGGGATCCTGCCTCTGAAGGTTTTTCACCGAATGCTCAAGGGTTAACGGATCCGAAAGTCAAAAAT GCTTGGAGCATATTGCCAAGAACTAAACCCGTTAGAATGCTGGAACTTCTGAGTGCGGAAGACTCACGCTACGTAAGGCA ACAAATTGCGGAAAAGCTGAAAGGCACCTATTCAGAAAGCCTTGCTAAGAACGTGTTTGAATACTTCCAATATGGTGGAG AAGTCGCTGGACATGGAATCAATAATGCGACGACAGGAAGTGTGCAACAGCCTGAACCAGCGATCTTATTTGAGTTTCGC AGTGTACCGAGTGCATTAAGTGACTTTGTACCCAAAACAGCGTCAACGGTGAAAGTGGATGTTAAGGCACTCGATCATTT TGACTCGGCAAGCCGTAAAGCCATCATTACTGAAGTAAATGCTTTGGTTAGCGGTAGTGAGGATTTCGATGCTTGGTATC AGGAGTATCGAGCAAGCAAAGGACAGCCGCCAGTCAAAAATCCTAAGTCCAGTGCATCCGCCAATCACAAAGCTGAATGG TTGATGACGCAGCATGCTGAACAATGGGCGAAAATTACCGCTCCTTATACTGATAACCATGAGACGCTCACATCTACCAA GCTTGCTTCTAACGATAAAGAAGAATTACACGCTTTAGGTGAAACGTCGAATCTAGAGAATAACAAGCAGCAAGAAAACG TCGCTTCCATAATTAACACCATGTTAAATGACATGCTGCCATTCTATGCACTTCGTACCGAACGAAATCTACTGGTACAA GAAGGAGATGAAGGCTTCGAAGTGCGTGCTTGGCCAGGAACCGAAGACAAGAGTAAAACCATTATTCTTGAGGATCCTGA AGACGCGGCTCAGCACAAAGCCATCGAACGCTTCATTCTGGCCAACTTCGATAATTTCGAACAAATGCCAGACGAGCTCT TCTTGGTGGATAACAAAGTGATTTCACACCATGAAGGTCGTACACATGTGTTGGCGCAAAAAGTCGATGGTGCATGGCAA TACAACGCCACAGTCGAGCTGATGTCAGTCACTGAACTACTGGATGCGGCGAATGTAACGGGTAAGATCCGCGGTGAAAG CTATCAGCAAGTGATCGACGCATTGACTGATTACCACGCCAGCATCACTGAGCACGCAGATTATGAACCGGAGTCCGTGG AAAAACTGCTCAACTTGCGTAAAAAAATTGAAGGTTATGTACTCGGACACCCAGACTCAGGCCGTGTTGAAGCGATGAAT TCACTGTTAAATCAGGTGAATACGCGTTTAGATGAAGTTTCACTGCTGTCAGTTGCTGAGCAAACTATCCAAGCGCAAAA CAGTTTCAGCCGACTATATGACCAGCTAGAAGCCGCTAACTTGAAAGAGAGTAAGCACCTTTATCTGGATCAAAATGGTG ACTTTGTTACCAAAGGCAAAGGTAATCTTGCCAATATCGATCTGCTAGGTAGCCGCGAAGCTGTGCTTGAAAAAGTGAAG TTAACAGTAAGTAACGAGTACGGTCAAACCGTTGCGGATACAATTTTTGCTGGATTATCAGCCAAAGATCTTGCCAAAGA CGGTAAAGGGGTTGATATCGCGGGTTTGAATAAAGTACATCAAGCGATTGAACAGCATCTGTCACCTGTCAGCGCCACGT TGTACATTTGGAAACCGAGTGATCATAGCGCGCTAGGTCATGCCGCATTGCAAATAGGCCAAGGTCGCACGCAACTTGAA GGTCAAGCTGCAGCTGATTTTAACCAGCAAAATTACGTAAGCTGGTGGCCACTAGGCAGCAAGTCATCCAATATCAGCAA TATCTTGAATGTGGCCACAAAAGACCAACCTGATCTTAAGCTGCGCTGGAGCGACTTCAGTCAACCTGCACATCAAAATG ACACGCTTGAGCATGATGTTGCTTCGGAAGAAAACGATGGCTTTGGTTTGCATGATGGCGACATTAAGCTGAAACGCTTT ATCGAGAAGCTCAATGCCGCGAAAGGAATTGACGCTTCATTTAAAGAGGCTTCTGAAGGTTACGCGAGCGTACTACTGGG TAACCCAGATATGCTCGAAACGACAAGTATTCCTGCACATGTTTTCCAACCATTTGTCGAACAATGGAATGACACCAGTT ATGACATGATGGACGTGGCACACCGTTTTGCGCAAGAGCTCAGACTACAGGCTCAAAGAAGTGACGATCCCGAACTGCTT GAAAAGCGCATCGGCAATGTGATTCGCCAATTTGCAGAAAGAGCACTGGAAGAGATCGAAACCTTCAAAGCAAGCCAAGC CGATCAAGGTCGAGTATTCCGAATTAACCTTGAAGGCCTCGATGTGGCGGCAATGCAAGCAGAATGGCATCGTCTAAGCA ACGATCCGGATGCTCGTTATCAATTACTGACCAAAAACTGCTCCAGCACAGTGGCTAAAGTGTTGAAAGCCGGCGGGGCG GATAAACTGATTGGCCATACATGGCTGCCTAAGTTTGGTGTTTGGACGCCGACCGAGCTTTTCAACTTTGGTCAGGCACT GCAGGAAGCTCAGCTGGAAATTGCCGCGAAGAAGCAAAGTCATCAAGTCACTGATGTCCTTGATGCCTTGTCAGGCAATG AGAAGCCTAAAGAAAACGTGGCGATTGAAAATGATGGTACGCCACCGCGCGATAAAGAATCTCTGAGCCCATTGACTCGA TTCCTCAATAACGAGTTGTATGGTGATAAAGAGGCTCGCCGTAAGATTGGCGAAATCACGCAAACCCTACTTGATCACGC GGTGGAAAAAGGTGAATCGCAGAAAATCACTCTGCAAGGAGAAGCGGGCCGTCTAACGGGGTATTACCATCAGGGAACAG CCCCAAGCGAAGGTGAAACGAGCTCGCCAAGCGGCAAAGTCGTATTGTTCCTGCACGGTTCTGGTTCTTCTGCTGAAGAG CAAGCGAGCGCGATTCGAAATCACTACCAGAAGCAAGGTATCGATATGCTCGCAGTCAACCTGCGTGGCTATGGTGAAAG CGACGGTGGACCAAGCGAAAAAGGCTTGTACCAAGATGCTCGCACCATGTTCAACTACCTAGTGAATGATAAGGGTATTG ACCCAAGCAACATCATCATTCACGGCTACTCAATGGGCGGTCCAATTGCCGCAGATTTAGCACGTTATGCCGCGCAAAAC GGCCAAGCGGTGTCTGGCTTATTGCTTGACCGTCCTATGCCAAGCATGACCAAAGCAATCACCGCTCACGAAGTGGCGAA TCCAGCGGGCATTGTGGGGGCTATCGCGAAAGCGGTTAACGGCCAGTTCTCTGTAGAGAAAAATCTCGAAGGTTTGCCAA AAGAGACATCCATTCTGCTGTTGACCGATAACGAAGGTTTGGGTAACGAAGGTGAGAAACTTCGTACCAAACTCACTGCC TCTGGTTACAACGTCACTGGCGAGCAGACATTCTATGGTCACGAAGCAAGCAACCGTTTGATGAGTCAATATGCGGATCA AATTGTCTCCGGTTTGTCCAGCAGTGCAAGTGTAGATGAAGACCTAGATCAACAAGGGTTGGATACCACATCAACCAAGG ATCAAGGTATCTCAAATAAGAATGATCATCTGCAAGTGGTGGATAGTAAAGAAGCATTAGCGGATGGAAAAATACTCCAT AATCAAAATGTTAATAGCTGGGGCCCGATTACGGTTACACCAACGACAGATGGTGGTGAAACCCGCTTCGACGGTCAAAT CATCGTTCAAATGGAAAACGACCCGGTAGTAGCAAAAGCGGCAGCCAATTTAGCAGGTAAACATGCTGAAAGCAGTGTGG TGGTGCAGCTCGATTCAGACGGCAACTATCGCGTGGTGTATGGCGATCCGTCAAAACTGGATGGAAAGCTACGTTGGCAG TTGGTGGGGCATGGTCGCGACCACTCAGAAACTAACAATACTCGCTTAAGTGGTTACAGTGCCGATGAGTTGGCCGTGAA ATTGGCCAAGTTCCAACAGTCGTTTAATCAAGCCGAAAACATCAACAACAAACCGGATCACATCAGTATTGTTGGTTGTT CTTTGGTGAGTGACGACAAGCAAAAAGGCTTTGGTCATCAGTTTATTAACGCGATGGATGCGAATGGTCTTCGTGTCGAT GTCTCTGTTCGTAGTTCTGAACTGGCCGTAGACGAGGCGGGACGTAAGCATACCAAGGACGCGAATGGCGATTGGGTTCA AAAGGCAGAAAACAACAAAGTTTCGCTAAGCTGGGACGCGCAAGGTGAAGTTGTTGCCAAGGATGAACGTATTCGCAATG GTATTGCGGAAGGCGACATCGATCTCTCTCGTATTGGTGTCAACAATGTCGATGAACCTGCTCGTGGCGCGATCGGTGAC AATAATGACGTGTTTGATGCGCCAGAAAAACGCAAACCAGAAACGGAAGTGATTGCCAATTCTAGCAGCAGTAATCAATT CAGCTACTCAGGTAACATTCAAGTTAACGTGGGCGAAGGGGAGTTTACGGCGGTGAACTGGGGGACATCGAATGTGGGCA TTAAAGTCGGTACTGGTGGCTTTAAATCGCTGGCCTTTGGTGACAATAACGTTATGGTTCATATCGGTGACGGTGAAAGC AAACACAGTGTTGATATCGGTGGCTATCAAGCACTGGAAGGTGCGCAAATGTTCCTCGGTAACCGTAATGTGAGCTTTAA TTTCGGACACAGTAATGATCTGATCCTAATGATGGATAAGTCGATCCCAACTCCACCACTCGTCAATCCATTCGACGGTG CCGCACGTATTTCTGGTGTGTTGCAAGGTATTGCTACGTCTGGAGAGGGAGAAGATTGGCTTGCCGCTCAAGAGCAGCAA TGGACACTGTCTGGCGCGAAGAAGTTCGTCAAAGATATGTCTGGTTTGGATCAAAGTAGCAGTGTGGATTACACCACATT AGTTGAATTGGATTCACAAAATGAACGTGATAGCCGTGGCCTGAAGCACGATGCAGAAGCGACACTGAATAAGCAATACA ATCAGTGGCTAAGCGGTAACGGTAATAGTGGCACGAGTCAGCTCAGCCGCGCTGATAAGCTTCGTCAAGCCAATGAAAAG CTAGCATTTAACTTTGCCGTAGGTGGACAAGGGGCGGATATTCAAGTCACGACGGGTAACTGGAACTTTATGTTCGGCGA TAACATTCAGTCGATTTTGGATACCAACTTAGGTTCACTGTTTGGTCTCATGACGCAGCAGTTCACCGCAACGGGACAAG CAAAAACCACCTTCACTTATACGCCACAAGATTTGCCGCGCCAGCTCAAGAATAAGCTACTCGGCCAGTTAGCTGGAGTA GGGGCTGAAACGACATTGGCGGATATTTTTGGTGTGGATTACACCGCGTCAGGTCAAATTGTTTCGCGTAATGGTCAAGC CGTCGATGGAGTGGCGATTCTCAAAGAGATGCTGGAAGTCATCGGTGAGTTCAGCGGAGATCAACTGCAGGCTTTTGTCG ACCCAGCTAAGTTACTGGATAGCTTGAAAGCGGGTATCGACATGGGAGCGGATGGCATCAAGTCTTTTGCTGAAACTCAT GGGCTGAAAGAGAAAGCGCCTGAAGAGGAAAAGGACAATTCTTCGGTTTCTGTTAATGGTGCGAACGTGAACAGTGCGCA AGGTGCGACTGTGGCTGATGGCAATACTGAAACAGCAGAAACACAAGATCGTGCCTTTGGCTTTAACTCGCTTAACCTGC CTAACTTGTTTGCGACTATTTTCAGCCAAGATAAGCAGAAGGAAATGAAGTCACTGGTGGAGAATCTTAAACAGAATCTC ACCGCCGATCTGCTGAATATGAAGGAGAAAACGTTTGATTTCCTTCGTAATAGTGGCCATCTCCAAGGAGATGGTGATAT CAACATCTCCCTAGGAAACTACAACTTCAACTGGGGTGGTGATGGTAAAGATCTCGGTGCGTATCTCGGAGATAACAACA ACTTCTGGGGTGGACGAGGCGATGATGTGTTCTACGCAACAGGCAAGTCAAACATCTTCACGGGTGGAGAAGGCAACGAC ATGGGCGTTCTGATGGGGCGTGAAAACATGATGTTTGGTGGTGATGGCAACGACACGGCAGTGGTTGCTGGACGCATTAA CCATGTCTTCCTTGGTGCTGGTGACGACCAGTCGTTTGTCTTTGGCGAAGGTGGTGAAATTGATACCGGTTCAGGCCGTG ACTATGTGGTGACTTCTGGCAACTTCAACCGTGTGGATACGGGAGATGATCAAGACTACTCCGTTACGATTGGCAACAAT AACCAAGTGGAACTCGGAGCAGGTAATGACTTTGCCAATATCTTTGGTAACTATAACCGTATCAATGCCGGTGCGGGTAA CGATGTGGTGAAACTGATGGGTTACCATGCCGTGCTAAACGGTGGTGATGGAGATGATCACCTGATTGCAACGGCCATCT CTAAGTTCAGCCAGTTCAACGGTGGTGAAGGCCGTGATCTGATGGTACTTGGTGGTTATCAAAATACTTTCAAAGGTGGC ACGGATGTGGACAGCTTTGTGGTGAGCGGTGATGTTATCGACAACCTTGTGGAAGACATTCGCAGCGAAGATAACATTGT CTTCAATGGTATCGATTGGCAGAAACTGTGGTTCGAGCGCAGCGGGTATGACCTGAAACTGTCGATTTTGCGTGATCCGT CTAACGACAGTGACCAATCGAAGTTTGAGCATATTGGTTCGGTGACATTCAGTGATTACTTTAATGGTAACCGCGCTCAA GTGGTTATCGGAATGAGTGAGAAAGACCTGTCGGGTGAACGTGAATACACCATGTTATCGGATAGTGCGATTGACGCTCT GGTTCAAGCGATGAGTGGTTTTGAACCGCAAGCGGGTGACAATGGCTTTATCGACAGCCTAGAGAGTAAATCTCAAGCTG CGATCAGCATGGCGTGGTCAGACGTGGTTCACAAAAAAGGATTGATGGTGTAA Protein sequence : MTSMFSETNSKSIVVPTKVSPEPERQEVTRRDVRISGVNLESLSAVQGSQPTGQLASKSVPGFKSHFASTSIGIENELSG LVVVLPKNSAQTFGYVHDSQGNPLFMLTKDMNQGGYSNPVGINDIQGVNNWQTHTIELVTYPSEISDTAAVESRKEAMLW LAKEFTDHINQSNHQSLPHLVSDDGRFTLVISNSKHLIAAGNGTSIDAQGKTIGMTPSGQQATMAISAKEFGTSSSPEVR LLESAPWYQAGLRDEFLANAKNTTLDDPATAQNVYAYLTSVYSKTADLAKEYGIYINDWDPASEGFSPNAQGLTDPKVKN AWSILPRTKPVRMLELLSAEDSRYVRQQIAEKLKGTYSESLAKNVFEYFQYGGEVAGHGINNATTGSVQQPEPAILFEFR SVPSALSDFVPKTASTVKVDVKALDHFDSASRKAIITEVNALVSGSEDFDAWYQEYRASKGQPPVKNPKSSASANHKAEW LMTQHAEQWAKITAPYTDNHETLTSTKLASNDKEELHALGETSNLENNKQQENVASIINTMLNDMLPFYALRTERNLLVQ EGDEGFEVRAWPGTEDKSKTIILEDPEDAAQHKAIERFILANFDNFEQMPDELFLVDNKVISHHEGRTHVLAQKVDGAWQ YNATVELMSVTELLDAANVTGKIRGESYQQVIDALTDYHASITEHADYEPESVEKLLNLRKKIEGYVLGHPDSGRVEAMN SLLNQVNTRLDEVSLLSVAEQTIQAQNSFSRLYDQLEAANLKESKHLYLDQNGDFVTKGKGNLANIDLLGSREAVLEKVK LTVSNEYGQTVADTIFAGLSAKDLAKDGKGVDIAGLNKVHQAIEQHLSPVSATLYIWKPSDHSALGHAALQIGQGRTQLE GQAAADFNQQNYVSWWPLGSKSSNISNILNVATKDQPDLKLRWSDFSQPAHQNDTLEHDVASEENDGFGLHDGDIKLKRF IEKLNAAKGIDASFKEASEGYASVLLGNPDMLETTSIPAHVFQPFVEQWNDTSYDMMDVAHRFAQELRLQAQRSDDPELL EKRIGNVIRQFAERALEEIETFKASQADQGRVFRINLEGLDVAAMQAEWHRLSNDPDARYQLLTKNCSSTVAKVLKAGGA DKLIGHTWLPKFGVWTPTELFNFGQALQEAQLEIAAKKQSHQVTDVLDALSGNEKPKENVAIENDGTPPRDKESLSPLTR FLNNELYGDKEARRKIGEITQTLLDHAVEKGESQKITLQGEAGRLTGYYHQGTAPSEGETSSPSGKVVLFLHGSGSSAEE QASAIRNHYQKQGIDMLAVNLRGYGESDGGPSEKGLYQDARTMFNYLVNDKGIDPSNIIIHGYSMGGPIAADLARYAAQN GQAVSGLLLDRPMPSMTKAITAHEVANPAGIVGAIAKAVNGQFSVEKNLEGLPKETSILLLTDNEGLGNEGEKLRTKLTA SGYNVTGEQTFYGHEASNRLMSQYADQIVSGLSSSASVDEDLDQQGLDTTSTKDQGISNKNDHLQVVDSKEALADGKILH NQNVNSWGPITVTPTTDGGETRFDGQIIVQMENDPVVAKAAANLAGKHAESSVVVQLDSDGNYRVVYGDPSKLDGKLRWQ LVGHGRDHSETNNTRLSGYSADELAVKLAKFQQSFNQAENINNKPDHISIVGCSLVSDDKQKGFGHQFINAMDANGLRVD VSVRSSELAVDEAGRKHTKDANGDWVQKAENNKVSLSWDAQGEVVAKDERIRNGIAEGDIDLSRIGVNNVDEPARGAIGD NNDVFDAPEKRKPETEVIANSSSSNQFSYSGNIQVNVGEGEFTAVNWGTSNVGIKVGTGGFKSLAFGDNNVMVHIGDGES KHSVDIGGYQALEGAQMFLGNRNVSFNFGHSNDLILMMDKSIPTPPLVNPFDGAARISGVLQGIATSGEGEDWLAAQEQQ WTLSGAKKFVKDMSGLDQSSSVDYTTLVELDSQNERDSRGLKHDAEATLNKQYNQWLSGNGNSGTSQLSRADKLRQANEK LAFNFAVGGQGADIQVTTGNWNFMFGDNIQSILDTNLGSLFGLMTQQFTATGQAKTTFTYTPQDLPRQLKNKLLGQLAGV GAETTLADIFGVDYTASGQIVSRNGQAVDGVAILKEMLEVIGEFSGDQLQAFVDPAKLLDSLKAGIDMGADGIKSFAETH GLKEKAPEEEKDNSSVSVNGANVNSAQGATVADGNTETAETQDRAFGFNSLNLPNLFATIFSQDKQKEMKSLVENLKQNL TADLLNMKEKTFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDDVFYATGKSNIFTGGEGND MGVLMGRENMMFGGDGNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSVTIGNN NQVELGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRDLMVLGGYQNTFKGG TDVDSFVVSGDVIDNLVEDIRSEDNIVFNGIDWQKLWFERSGYDLKLSILRDPSNDSDQSKFEHIGSVTFSDYFNGNRAQ VVIGMSEKDLSGEREYTMLSDSAIDALVQAMSGFEPQAGDNGFIDSLESKSQAAISMAWSDVVHKKGLMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1059 | YP_001217005.1 | RTX protein | Virulence | CTX | Protein | 0.0 | 99 |
