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Name : VCD_002618 (VCD_002618) Accession : YP_002878354.1 Strain : Genome accession: NC_012668 Putative virulence/resistance : Unknown Product : type I restriction-modification system DNA-methyltransferase subunit M Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 1761834 - 1763426 bp Length : 1593 bp Strand : - Note : - DNA sequence : ATGGCAAACAAGAACATGGCTAAGAAACCAGCAGCAAAGAAAAACGAAAAATCATTTGAAGAAACACTCTGGGATGCAGC CAACAAGCTACGTGGTAGTGTTGAATCATCCGAATACAAACATATCGTATTAAGCCTGATATTCCTCAAGTTCATCAGTG ATACCTTTGAAAAACAGCGTCAAAAGCTAATTGATGCAGGGCTAGAAAAACACATTGATATGGTGCCTGCTTACACCAAG GACAATGTTTTTTATCTACCTGAAGAGAGCCGTTGGAGCTTTATTCAGAAAAACGCTAAACAAGAAGATATTGCCCTAAA GATTGATACCGCTTTAAGTACCATCGAAAAAACCAACAAAGCACTGCAAGGCGCATTGCCTGATAACTATTTTTCTCGTC TTGGTTTGGATGTCAGCAAGCTAGCCGCACTAATCGATGTGATTAACAACATCGACACCCTAGCCAATCCACACGAAGAT GTGGTGGGTCGTGTCTACGAATATTTCTTGTCTAAATTTGCGATTGCAGAGGGTAAGGGTAAAGGCGAGTTCTACACACC AAAGAGCATCGTTAACCTAATCGCGGAATTGATTGAGCCATACAAAGGTAAAATCTATGACCCTTGTTGTGGTTCGGGCG GTATGTTTGTTCAGTCAATGAAGTTCATTGAGAACCACAAAGGCAACAAGAAAGACATTTCTGTGTATGGTCAAGAGTAT ACAGGTGCAACCTACAAACTAGCGAAAATGAACCTCGCTATTCGTGGTATCTCAGCCAACCTTGGCGCAGCCGCCAAAGA TACCTTTGCCAATGATCAGCACGAAACCCTGAAAGCTGATTTTATTATGGCAAACCCACCATTTAACCAAAAAGATTGGC GAGCTTCCGATGAGCTGGTTGATGATCATCGTTGGGACGGCTACGAAACACCACCAACCAGTAATGCCAACTACGGTTGG ATTTTGCATATGGTTTCCAAGCTATCTGAGAACGGAGTTGCAGGATTTATTCTTTCAAACGGTGCATTATCAGGTGATGG AACAGAAAAAGAGATTCGTAAGAAACTCATTGAAAATAATCTAGTTGAAGCGATTATCCTCTTGCCTCGCAATATGTTCT ATACCACTGATATCAGTGTGACTTTATGGATTTTAAACAAGAATAAAAAAGCGCATACCGTGCCACACGAGGATGTCACT CGTAACTATCGTGATCGTGAAGAAGAAATTTTGTTTATGGATCTACGTCAGCGTGGAGAACCGTTTGAGAAAAAGTTTAT TCAATTCTCGGAACAAGATATCAAAGAACTCGCAGATACCTTGCACACTTGGCAACAGGTAGGTGCAGAAGATAAATACA AAGATATTGCAGAATACTGTTATTCAGCGACCAAAGAAGAGATTGCTACTAAAGACTATTCTCTCGTACCAAGTAAGTAT ATTGAATTTACAAATCGCGATGAAAACATTAATTTCGATGAAAAAATGAGCAACCTAAAAGAGCAGTTTAGTCAGCTTTT AGCTCAGGAAGAAAAATCAAAAAATGAACTACTAAACGTTTTTAAAGAGCTGGGCTATGAGATCAAACTATAA Protein sequence : MANKNMAKKPAAKKNEKSFEETLWDAANKLRGSVESSEYKHIVLSLIFLKFISDTFEKQRQKLIDAGLEKHIDMVPAYTK DNVFYLPEESRWSFIQKNAKQEDIALKIDTALSTIEKTNKALQGALPDNYFSRLGLDVSKLAALIDVINNIDTLANPHED VVGRVYEYFLSKFAIAEGKGKGEFYTPKSIVNLIAELIEPYKGKIYDPCCGSGGMFVQSMKFIENHKGNKKDISVYGQEY TGATYKLAKMNLAIRGISANLGAAAKDTFANDQHETLKADFIMANPPFNQKDWRASDELVDDHRWDGYETPPTSNANYGW ILHMVSKLSENGVAGFILSNGALSGDGTEKEIRKKLIENNLVEAIILLPRNMFYTTDISVTLWILNKNKKAHTVPHEDVT RNYRDREEEILFMDLRQRGEPFEKKFIQFSEQDIKELADTLHTWQQVGAEDKYKDIAEYCYSATKEEIATKDYSLVPSKY IEFTNRDENINFDEKMSNLKEQFSQLLAQEEKSKNELLNVFKELGYEIKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 1e-118 | 47 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 7e-120 | 47 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 1e-119 | 47 |
