Gene Information

Name : VCD_002608 (VCD_002608)
Accession : YP_002878344.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1744607 - 1746058 bp
Length : 1452 bp
Strand : +
Note : -

DNA sequence :
GTGAGTCTAAATATAAAAAAGCTCAAAGTTAGTTTGCCTGCTAATCCTTTTGGTCAAGCCATCAAGGACTTTGCACATCT
ATCGAGTCAGCTAGAAGTGCTTTCTAAGAGTGCCGGTATTGAAAACAATAAGTTCCGAACTGCATATGGAGAAGTATGTA
ATGCGCTTGCCTCTAAGAAAAGAGTTGAGGACGTTATAGATAGCTCTGTACACGTTCGCGCCTTAGCTCTTTCGCTACAT
ACGGATGCGAAGAAAAATGTCAGCTTTACGCGCAGATTGCTTAATAAAATTACAGAAATTGTAAAAAAACCAAGCTCTTT
AGTCATAGAGTCGTTTTATCAGCATTTCTTATCAGAGTATGACCGACTGGCAGACTTGGAAGCTACAGCAGACTGGTTGT
TGGAGGCTAAAAGGCTGCGAGGCAATGATGAGCAGTTTGATGAAAATATATTGTCAACCAATGGCCCCAAGTGGCTTGCG
GAAAGGGCTATTCAAAATAATGTCGATTTTGATCATTTAATTGCGGAGATGAAGCTGGAACGTTATGCAAATGGCAGATA
TTTAACGGCGGCTAAAGGCATCTACTATATTGAGCAGTTAAACACTATACCATTAGGCCAAGATCATCCTCTCCTAGAGG
AGGTTCAAAAAACGGTGGTTTTTGATTCTCGATATGACTCTGAAAGTTTGTTAGGGCATCAAATTCTTAGAATTTTGATT
GGCCGATCGATAGGTTCTCACATCAGTGAGCCTTGGATGAATGTGATCTTAGCAATTGGCGGTGACCCACGAGTACCAAG
TTCAAATCCAAGATATATTAAGTGGTGGAAGAGTTTAGAACCAAATCTGGTTCAAGCTGTTCTCGGATGGTTATCAAAAC
TAGACTTGAAGTTGTTTCTGGAAGCGTTGGAGGATTATTCTTACTCTTCAGCTAATTACGAGCTACAGAGAATGTACCCA
TCTCGGAAAAGTTTCTTAGAGGGGATGTTCGATGCGGGGGTTATTTCAAATACCCGGCTTTATTTGAGTCTGGATGCTGC
AAGGTATTTGAAGAGAAATTATGACCCTAAGCACTTGCCAAATTTCTCTACTGTTAAAGATGGTGACAAATCGATAATTT
ATGTGCAAATGAACGGCGCTCACATGGTTGAGGGGAGCCATAGTTGTTATTTGTGGTTGTACCGGTATCTTGACCCTTCC
GTTTGTGTGTTTAACTATAACATTGATAGTCCTACGTACTCACAACTCACAATCGGTATAAACAATCAAATGTCCAGATT
GTCATCTGGTGCAGTTGCTAAAATAACGCACTCTCCGAGTGGTTACGCATGGCAACGAAAAGCACTTATAGCACTAAGAG
AGTTAGGAGTTAAATTGACGCCGAAAGATGTGCTTTCGAATGAAGATTATATTGATTTTAAACAACGTTATGGGGTGCGA
GAGTGGAGTTAA

Protein sequence :
MSLNIKKLKVSLPANPFGQAIKDFAHLSSQLEVLSKSAGIENNKFRTAYGEVCNALASKKRVEDVIDSSVHVRALALSLH
TDAKKNVSFTRRLLNKITEIVKKPSSLVIESFYQHFLSEYDRLADLEATADWLLEAKRLRGNDEQFDENILSTNGPKWLA
ERAIQNNVDFDHLIAEMKLERYANGRYLTAAKGIYYIEQLNTIPLGQDHPLLEEVQKTVVFDSRYDSESLLGHQILRILI
GRSIGSHISEPWMNVILAIGGDPRVPSSNPRYIKWWKSLEPNLVQAVLGWLSKLDLKLFLEALEDYSYSSANYELQRMYP
SRKSFLEGMFDAGVISNTRLYLSLDAARYLKRNYDPKHLPNFSTVKDGDKSIIYVQMNGAHMVEGSHSCYLWLYRYLDPS
VCVFNYNIDSPTYSQLTIGINNQMSRLSSGAVAKITHSPSGYAWQRKALIALRELGVKLTPKDVLSNEDYIDFKQRYGVR
EWS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1762 NP_231397.1 hypothetical protein Not tested VPI-2 Protein 0.0 100
VC0395_A1360 YP_001217303.1 hypothetical protein Not tested VPI-2 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_002608 YP_002878344.1 hypothetical protein VFG1095 Protein 0.0 100