Gene Information

Name : VCD_002603 (VCD_002603)
Accession : YP_002878339.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1479
EC number : -
Position : 1735226 - 1736638 bp
Length : 1413 bp
Strand : +
Note : -

DNA sequence : 
ATGGCGGTTGTTGTTGCCAGTTGCACACTGGATAAGCTGTTTTCTAATGAGTCGATTTTAGCTTCTGACGGTAAAGTTCA
AAAAAACGTTCACGGGATGCTTGCCATCCCTGAATATCAGCGTCCCTATCGCTGGAATGAAGAGCAAATCACCCGTCTAT
TGAAAGATTTCAAGCTTCATCAGCAAGAGTTAAATGACAAGCTTGAAACAGAGCATTGCCCATTCTATTTAGGTAGTGTG
ATTCTGCATCAGCAGGGTGACAAGCTGAATATCATCGATGGTCAGCAACGTTTGACCACAATGGCGTTGATGTCTTATCT
AGCAAATAAACATGTCGATCTTAAACTAGTTTACGAATCGCCTGAGAGTCAGCAGCAAATCAAACACAATCTTGGTTGGT
TGTATAGAAATGAAGCCTCTTTGGCTGATATCGATTTTGCTCAAATCAATATTACCTTGGTGGTGACAGACAGTGAAGAT
GAAGCCTACCGCTTTTTTGAAACCCAAAACACGGGCGGCGTGCGATTAGCCGGGCCAGATATTATTAAAGCGCACCATCT
TAGAGCGGTTGATGAGAAAGATAAGTCTGCGGTAAACACCTTTGCCACACGTTGGGAAGCGCTGGGGGATTTAAACCCCG
TGGTCGATATTTTGCTACGTGGTCGCTATTGGCAATATCTGAACTTCCGAGACTACCCGCTGCACAACCAAACTCAGCAA
GTGCGAAATAGTATTGTCACCGAACTGGCAGAGCACACAGGCAAAGGCGACGATATTGCCTTTGGTAGAATTGCTCGTAC
TTATATGCCCAACGGTGGAGAGAGCTTGGCACAGCCTCAAGTTGGCTATGAATTGCGCCAGCCGCTAAACAGTGGCGCTA
ATACCATTCACTATTTGCAATATTTTGAGCAACTGCGCCAAACCTATTTGCTGAAAAACTCAACGCAAGGTGAGCTTGCA
GGCTTTTACGAGTTCTATCAAAAGCTGGTGTGTAAACTTGATGGCTGCGGCTATCTCAAACAGCTTTATGACGCTTGCCT
GCTGCTCTACATCAGTCAGCATGGGCAGCAAAGCCTAGAGGTAGCAGCGAAAAAACTTTTCCGCGTGGTTTACTCTCGAC
GTGTAGAGAACCAAAAAGCAGTAAAAGAGAAATCGGTTCCTGCTTTTGTCAAAGAAACCCCAGTGCTGGATTGGATTGCG
ATGAGCTATACCCCAGAGCAGTGTTTCGCACAGCTTGATGGTTTTAAGCTGTCGGTAGACAAGAGTGGCTTTGATAAAAA
CAGCGTTAAAAAACGTTTCGTCGAAAAAGTGTCTCAATACTTTGGCCTTGATATAGACAAGCAAGATTATGCCAATCAAT
TTGGCCCTGCATTTAGCCAACACATCTCTGCGTTAGGAGCAAAACATGGGTGA

Protein sequence : 
MAVVVASCTLDKLFSNESILASDGKVQKNVHGMLAIPEYQRPYRWNEEQITRLLKDFKLHQQELNDKLETEHCPFYLGSV
ILHQQGDKLNIIDGQQRLTTMALMSYLANKHVDLKLVYESPESQQQIKHNLGWLYRNEASLADIDFAQINITLVVTDSED
EAYRFFETQNTGGVRLAGPDIIKAHHLRAVDEKDKSAVNTFATRWEALGDLNPVVDILLRGRYWQYLNFRDYPLHNQTQQ
VRNSIVTELAEHTGKGDDIAFGRIARTYMPNGGESLAQPQVGYELRQPLNSGANTIHYLQYFEQLRQTYLLKNSTQGELA
GFYEFYQKLVCKLDGCGYLKQLYDACLLLYISQHGQQSLEVAAKKLFRVVYSRRVENQKAVKEKSVPAFVKETPVLDWIA
MSYTPEQCFAQLDGFKLSVDKSGFDKNSVKKRFVEKVSQYFGLDIDKQDYANQFGPAFSQHISALGAKHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1767 NP_231402.1 hypothetical protein Not tested VPI-2 Protein 0.0 100
VC0395_A1365 YP_001217308.1 hypothetical protein Not tested VPI-2 Protein 0.0 100
VPI2_0015c ACA01832.1 hypothetical protein Not tested VPI-2 Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_002603 YP_002878339.1 hypothetical protein VFG1100 Protein 0.0 100