Gene Information

Name : VCD_002597 (VCD_002597)
Accession : YP_002878333.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : sialic acid-induced transmembrane protein NanM
Function : -
COG functional category : S : Function unknown
COG ID : COG3055
EC number : -
Position : 1723628 - 1724698 bp
Length : 1071 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAATCTCATTTCAATTACTCCCTGAGCTTCCAGTAGGAGTTAAACACGGAGTGGGTGGAATAATAGGTCAAAAATT
GTATGCAGGGCTTGGTAGTTCTGGAAATGCATTTTTTGTTTTAGACCTAAAAGATATGAATAGTGGTTGGAAGTCGGCTG
CTGACTTTCCTGGAATTGCTCGAAATGATGCTGCCTATACAGTCTGTGGTAACAAGCTTTATGTTTTTTCAGGTGCAGGG
ATAGAGGGCAATAACAGCTTTCCAACAGTTTTAATGGATGGTTATGTATTTGATAGTCAAATCAATCAATGGAAACGATT
AGAGAGAACACTTCCTACCGGATTTCTTGGTGCATCTTGTTGTAGTCTATCACCGACGGAGATCATTTTTTTCGGAGGGT
ATGATAAGGATACTTTTAATAACTTCCTTTCTGAAATCTCAAAAATTGATGTAACAAAAGAGCCTAATAAATATAAAGAG
CTTATTACTATATTCATGTCTCAGCCAATCGATAACTATAATTGGAATAAAAATGTTTGGTCATTTACACCATGCAATGA
ACACTGGTCAGTTGTTGGTGAAAACCCATTTAAGCCTAATTGTGGTTCTGGAATAATTCATAAAAACAACGTTGTAACTT
TGATTGAAGGCGAAGTAAAGCCTGGTCTGAGAAGCTTAGAAACTAAGCGCTACTTGTTTAAAGAAGGAAAACTGGAATAT
TCTGATAGTAGTGCCTCTATTATTGATATATGTAAAAATCATGAAGGACTAGCTGGGCATTTTTTCGGTGAAATTGACAA
TAAGATAATTGTTATTGGTGGGGCATATTTTATTGGTAGTCAAGACGCATTTATAAAAGGAAACTTATATGCCCATAATG
GCCTCATTAAACACTTTAGTTCGAATGTTTGGATTTTTGATGGTAAATCCTGGGAGAATAAATGCCAATTAGATGCTGCA
GGTATTGCCTATGGCGTTTCCGCTTCAAACGGAAAAGCTATGTATGTTTTAGGGGGAGAAAACTCTAATGGTGATGCAAT
GACAAGATGCTTATCATTATTAATGGATTAA

Protein sequence : 
MAISFQLLPELPVGVKHGVGGIIGQKLYAGLGSSGNAFFVLDLKDMNSGWKSAADFPGIARNDAAYTVCGNKLYVFSGAG
IEGNNSFPTVLMDGYVFDSQINQWKRLERTLPTGFLGASCCSLSPTEIIFFGGYDKDTFNNFLSEISKIDVTKEPNKYKE
LITIFMSQPIDNYNWNKNVWSFTPCNEHWSVVGENPFKPNCGSGIIHKNNVVTLIEGEVKPGLRSLETKRYLFKEGKLEY
SDSSASIIDICKNHEGLAGHFFGEIDNKIIVIGGAYFIGSQDAFIKGNLYAHNGLIKHFSSNVWIFDGKSWENKCQLDAA
GIAYGVSASNGKAMYVLGGENSNGDAMTRCLSLLMD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1773 NP_231408.1 hypothetical protein Not tested VPI-2 Protein 3e-156 100
VC0395_A1371 YP_001217314.1 hypothetical protein Not tested VPI-2 Protein 3e-156 100
VPI2_0021c ACA01838.1 conserved hypothetical protein Not tested VPI-2 Protein 2e-156 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_002597 YP_002878333.1 sialic acid-induced transmembrane protein NanM VFG1106 Protein 1e-156 100