Gene Information

Name : VCD_002595 (VCD_002595)
Accession : YP_002878331.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : sialic acid utilization regulator RpiR family
Function : -
COG functional category : K : Transcription
COG ID : COG1737
EC number : -
Position : 1721447 - 1722277 bp
Length : 831 bp
Strand : +
Note : -

DNA sequence : 
TTGCCTAAAAATCTGATGGTTCGATTGCGCTCGAATACCGAACCTTTGAGCAAAAAACTCAGAGTTGTTGCTGATTATGT
GCTCGAAAATGCACATGAAGTTCAGTATCAGACGATCACCGATCTAGCGTTTAATACAAAAACAAGCGAAGCCACTGTAG
TCAGGCTATGCCGTGATTTGGGCTACAAAGGTTATTCGGATTTTAGAATGGCATTGGCGGTTGATCTTAGTCAGTCTGCA
AACCAATCTCAGCCCAAAATGGATGGCGATATTTGCGAAGTTTCTGCGCAAAGCGCGGTAGATAGTTTAATGGATACTGC
AAAACTGATAGACAGAGCTGCCTTAAATAGAATATGTGAGTTGGTTCATGGGGCTAAGTTTATTGGGTGTGTTGGTGTGG
GAGCATCCAGTATCGTCGGTCGCTATTTGGCGTACCGATTAGTGAGAATAGGTAAAAAAGCCATCATGTATGAAGATACA
CACTTGGCGGCAATGAGTGCTGGACAGAGTGTTGTCGGGGATGCATGGTTTGCAATATCGAGCTCAGGTTCTACAAAAGA
GGTGGTTCATGCGGCCACCCAGGCTCATCAACGCGGTGTGCCAGTTGTATCTCTTACGAATATTAGCCATAGCCCACTTT
CTTCGATTTCAGATGAAATGTTAGTGGCTGCAAGGCCTGAAGGCCCTCTCACTGGCGGTGCTTTTTCTTCTAAAGTTGGT
GCTTTGTTGCTTGTTGATGTTTTGATTAACACACTTTTAGATGTATATCCTGAATATTCAGCCTCCGTATTTGGTACTGC
GGAAGTGATTTTACCTTTAATGGATAGTTAA

Protein sequence : 
MPKNLMVRLRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYKGYSDFRMALAVDLSQSA
NQSQPKMDGDICEVSAQSAVDSLMDTAKLIDRAALNRICELVHGAKFIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDT
HLAAMSAGQSVVGDAWFAISSSGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGGAFSSKVG
ALLLVDVLINTLLDVYPEYSASVFGTAEVILPLMDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1775 NP_231410.1 hypothetical protein Not tested VPI-2 Protein 1e-118 99
VC0395_A1373 YP_001217316.1 hypothetical protein Not tested VPI-2 Protein 1e-118 99
VPI2_0023c ACA01840.1 RpiR family transcriptional regulator Not tested VPI-2 Protein 1e-118 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_002595 YP_002878331.1 sialic acid utilization regulator RpiR family VFG1108 Protein 6e-119 99