Gene Information

Name : VCD_002594 (VCD_002594)
Accession : YP_002878330.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : N-acetylneuraminate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0329
EC number : 4.1.3.3
Position : 1720416 - 1721312 bp
Length : 897 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAATTAACAGGTTTGATTGCTGCTCCACATACGCCTTTCACAAAAGATAACAAGGTTAATTTTGCGGCGATTGA
CCAAATTGCTGAGCTTCTGATTGAACAAGGAGTGAAAGGTGCTTATGTCTGCGGAACGACAGGTGAGGGGATCCATTGCT
CTGTCGAAGAAAGAAAAGCAATTGCAGAACGTTGGGTGAAAGCCGTTGATGGGAAGTTAGATGTTATTTTACATACAGGC
GCTTTAAGTATTGTTGATACCATCAACTTGACAGAGCACGCTGAAACACTGGATATCTTTGCTACCTCCGCTATTGGCCC
ATGCTTTTTCAAACCGGGAAGTGTTGATGATTTAGTTGAGTATTGTGCTCAAGTTGCTGCCGCAGCTCCTTCAAAAGGTT
TTTATTACTACCACTCAGGAATGTCGGGCGTGAATCTAGATTTAGAGCAGTTCTTGATTAAAGGCGAACAGCGCATTCCT
AATCTTTATGGCGCAAAATTCAATAATGCTGATTTGTATGAATACCAGCGTTGCGTGCGAGTATCGAATCGCAAATTTGA
TATTCCATTTGGTGTGGATGAGTTTTTACCTGCTGGTTTAGCCGTCGGTGCGGTAGGCGCAGTTGGTAGCACTTATAACT
ATGCTGCTCCATTGTATTTGAAAATCATTGAAGCATTTAACCATGGTAAACATGATGAAGTCGCAGCGTTGATGGATAAA
GTGATTGCGATTATTCGAGTATTGGTCGAATACGGCGGTGTTGCGGCAGGTAAAGTTGCCATGCAGTTACATGGTATTGA
TGCTGGGGATCCCCGCTTACCTATTCGTTCATTGAATGACAAACAGAAAGCGGATGTGCTTGCGAAGATGCGTGATGCTG
GGTTCCTGTCGATCTAA

Protein sequence : 
MKKLTGLIAAPHTPFTKDNKVNFAAIDQIAELLIEQGVKGAYVCGTTGEGIHCSVEERKAIAERWVKAVDGKLDVILHTG
ALSIVDTINLTEHAETLDIFATSAIGPCFFKPGSVDDLVEYCAQVAAAAPSKGFYYYHSGMSGVNLDLEQFLIKGEQRIP
NLYGAKFNNADLYEYQRCVRVSNRKFDIPFGVDEFLPAGLAVGAVGAVGSTYNYAAPLYLKIIEAFNHGKHDEVAALMDK
VIAIIRVLVEYGGVAAGKVAMQLHGIDAGDPRLPIRSLNDKQKADVLAKMRDAGFLSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1374 YP_001217317.1 dihydrodipicolinate synthetase family protein Not tested VPI-2 Protein 1e-132 100
VC1776 NP_231411.1 N-acetylneuraminate lyase Not tested VPI-2 Protein 1e-132 100
VPI2_0024c ACA01841.1 dihydrodipicolinate synthase/N-acetylneuraminate lyase Not tested VPI-2 Protein 2e-131 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_002594 YP_002878330.1 N-acetylneuraminate lyase VFG1109 Protein 6e-133 100