Gene Information

Name : VCD_002588 (VCD_002588)
Accession : YP_002878324.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : 3.5.1.25
Position : 1714622 - 1715758 bp
Length : 1137 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATTAAAGGCAATTTCAGCCACACGGCTTTTTGATGGAATTCAGTATTACGAGAATGCGGCAATGGTTTGGGAAGG
TTCACACATTCACTCCATTGTTCCTATTGAGTCTCTGACGGAGGATATTGAGCATCAACATTTTGATGGTGCATTGATCG
CTCCAGGATTCATTGACTTACAAGTTAATGGCGGTGGCGATGTCATGTTCAATAATGACATGACTCTTGCGGGTATTGAT
TCGATCTGCCGAGCACACAGAACTCACGGCACCGCCTATCTGCTTCCAACCTTAATCAGTGCAACACCGGAACACATCAA
CCGTGCACTTGATGCCATTCAATCTGCAATCGAAAATCAAGTCTCGGGTGTGTTGGGTATTCACTTAGAGGGGCCTTGGT
TAAACCCAGAAAAGAAAGGCGCTCATAACCCAGATCTGTTCTATTCCCCGACACCCGAACAACTTTCACAGTTTCACTGG
CCAACCAAAGGCAAAGTTCTTGTAACGGTCGCGGCTGAAAACCTCTCCATCGACTCACTAAAGTGGTTAAAGGATCATCA
TGTTACTCTCTCGTGTGGTCACAGTAATGCCACTACAGCCCAATTAACCACTGAGAAGTTAGCTCTCATTGATGGATTTA
CCCACTTATTTAATGCCATGTCGCCTTTTGAGAGTCGTGAACCCGGAGTTGTCGGTACAGCATTGAATACCGATCATGCT
TGGTGTTCAGTAATAACTGATGGAATTCATGTCCATCCACAAAGTTTTTTACTCGCTAAGCGAATCAAACCTAAAGACAA
ACTTCTTATTGTTACCGATGCCATGGCTAGCCTTGGCAGTGTGACTAGCCAGTTTGAATTGGATGGGGAAACCATTCGCG
TCATCGATAATAAACTGATTAATAGCAGAGGCAATCTTGCGGGAGCACACATCGGGATGGATGAATCGGTTGCCAATGTT
ATTCGTTGGGGAATCGCGGAAGATGAAGCATTAAAAATGGCCTCGTCTTATCCGGCTCAAGCAATTCAATGTGATGATTT
AGGGCAACTAAAACCCAATTATCGAGCCGCCGCCACTGTATTAAACTCCAAATATGAAAGCTTGGCTGTAGTCAGTGAAG
GCGTGCTCTACAACTGA

Protein sequence : 
MALKAISATRLFDGIQYYENAAMVWEGSHIHSIVPIESLTEDIEHQHFDGALIAPGFIDLQVNGGGDVMFNNDMTLAGID
SICRAHRTHGTAYLLPTLISATPEHINRALDAIQSAIENQVSGVLGIHLEGPWLNPEKKGAHNPDLFYSPTPEQLSQFHW
PTKGKVLVTVAAENLSIDSLKWLKDHHVTLSCGHSNATTAQLTTEKLALIDGFTHLFNAMSPFESREPGVVGTALNTDHA
WCSVITDGIHVHPQSFLLAKRIKPKDKLLIVTDAMASLGSVTSQFELDGETIRVIDNKLINSRGNLAGAHIGMDESVANV
IRWGIAEDEALKMASSYPAQAIQCDDLGQLKPNYRAAATVLNSKYESLAVVSEGVLYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 5e-177 100
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 5e-177 100
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-176 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_002588 YP_002878324.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 2e-177 100