Gene Information

Name : VCD_002573 (VCD_002573)
Accession : YP_002878309.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Virulence
Product : general secretion pathway protein A
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3267
EC number : -
Position : 1703161 - 1704201 bp
Length : 1041 bp
Strand : +
Note : -

DNA sequence : 
ATGAACTACAGCACAGTGCAGAGAGCGGTGAAAATGAACGAACCGCCTAAGAGACGTGCAGAAGAATTTAAAGAAAAAGT
CGAAGCGTTTTTTGCTTCGCACGGCCTGGAAGGAGTAAGCGGTTGGTCAAAGGCGGCAACCAATGACCAACCTGATCCCC
AGACTGAAACAAATCGAGAGTTAGAACTGGAGAATCCTATGTTAACACAAGAAGCTATGAAGCACTTTAAGCTATTTCGC
AACCCTTTTATTAATGACATTCGCGCTGTTCGCGACATCTATATGAATGAAGATAGTCGATATGTTTTAGCTGCGATGAA
AGATGTTGCAAGGAATCAAGGTATTTTGGCTGTTGTGGGAGATTCTGGCGCAGGTAAAAGCGTGCTGCGTCGATTGCTAC
TAGATGAGCTACATAACGATGGCGATATTTCAGTGATCCAACCCAAAATCATCGACAAGACGCGCGCCACCGCAGCAGGT
ATTTGTGATGCAATCATCAGCGATATCAGTAGTGAAGCACCTAAGCGCAGTATGGAAGCTAAAGCAAGACAAGTGGAACG
TCTACTTATGACAGCATTCAAAGGAGGACAGCGCCACGTTCTGATCATTGAAGAGGCTCATGATTTGACGATTCCTGTCA
TGAAGTACCTTAAGCGCTTTTGGGAACTTGAAGATGGTTTTTCAAAGCTGCTGGGTATTTTATTGGTTGGACAGACAGAG
TTGTTTCACCGCCTCGATGAGCGTCGTCATTACGAACTTCGTGAGTTTATTCGACGTTGTATGGTTATAGAGGTTCCACC
ACTTGATAACGATATTGAAGCTTACCTCAAGCATAAGTTTGAACGTGCAGGATGTGAGTATGAGCGCATCATGGATGATA
GTGCGGTTCCTGCCTTGAAACTGCGTTTACAAACTCGCCGCAACCAGTCAGGAAGCTTGGTTTATCCTCAGGTCATCAAT
AACCTGGTAACCAAAGCTATGAATCTTTGTGCTTCTTTAGGCGAAGACAAAGTAAATGAAGACATCATTAAGGAGCTGTA
G

Protein sequence : 
MNYSTVQRAVKMNEPPKRRAEEFKEKVEAFFASHGLEGVSGWSKAATNDQPDPQTETNRELELENPMLTQEAMKHFKLFR
NPFINDIRAVRDIYMNEDSRYVLAAMKDVARNQGILAVVGDSGAGKSVLRRLLLDELHNDGDISVIQPKIIDKTRATAAG
ICDAIISDISSEAPKRSMEAKARQVERLLMTAFKGGQRHVLIIEEAHDLTIPVMKYLKRFWELEDGFSKLLGILLVGQTE
LFHRLDERRHYELREFIRRCMVIEVPPLDNDIEAYLKHKFERAGCEYERIMDDSAVPALKLRLQTRRNQSGSLVYPQVIN
NLVTKAMNLCASLGEDKVNEDIIKEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1395 YP_001217338.1 hypothetical protein Not tested VPI-2 Protein 6e-154 100
VC1798 NP_231433.1 eha protein Not tested VPI-2 Protein 3e-154 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_002573 YP_002878309.1 general secretion pathway protein A VFG1131 Protein 1e-154 100