Gene Information

Name : VCD_002390 (VCD_002390)
Accession : YP_002878126.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 1497314 - 1498528 bp
Length : 1215 bp
Strand : -
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
ATGCAAAATATCGGGATGTCGTCAAAACTCGATAATGTCTGCTATGACATTCGAGGACCAGTGCTTAAACATGCTAAACG
CATGGAAGAAGAAGGGCATAAAATACTGAAGCTTAACATCGGTAACCCTGCCCCGTTTGGTTTCGACGCCCCAGACGAGA
TCCTAGTCGATGTGATCCGTAACCTACCTACTTCACAAGGTTACTGTGACTCGAAAGGCATTTATTCCGCTCGTAAAGCG
GTGGTGCAGTACTACCAGAAAAAAGGTATCCGCAGTCTGGACGTCGAAGATGTGTACATCGGCAACGGTGCATCAGAGCT
TATCGTGATGGCGATGCAAGCCCTGCTCAACAATGGCGATGAAATGCTGGTACCTGCCCCTGATTACCCACTGTGGACAG
CCGCGGTAGCACTTTCTGGCGGCAAAGCCGTGCACTACATCTGTGATGAAGAAGCCGATTGGTATCCTGACCTCGACGAT
ATTCGCAGCAAAATCACCCCGAAAACCCGTGGCATTGTGCTGATCAACCCCAATAACCCAACCGGTGCGGTTTACAGTCG
TGATTTCTTGCTGGAAATCATCGAGATTGCTCGCAAGCACAAGCTGATGATTTTCGCCGATGAGATTTACGACAAAGTGC
TGTACGACGGCGCGGTGCATACCTCAATCGCCACCTTAGCGGATGATGTATTAGTCGTCACCTTCAACGGCTTATCCAAA
GCTTACCGTGTTTGTGGTTTCCGTGGTGGCTGGATGTTCCTGACTGGCCCCAAACAGCAAGCACAAGGCTATATTGCAGG
GCTCGATATGCTGGCCTCGATGCGCTTGTGTGCCAACGTGCCAATGCAACATGCCATTCAAACCGCACTCGGCGGCTATC
AAAGTATCAATGAGCTGATTTTGCCGGGCGGCCGACTGCTGGAACAGCGTGATCGCGCATGGGAGCTGATTAACCAGATC
CCGGGGATTTCTTGCGTGAAGCCAAAAGGCGCGATGTACCTGTTCCCGAAAATTGATACCAAAATGTATCCGATCAAAGA
TGACCAGAAAATGGTGCTTGATTTCCTAGTGCAAGAAAAAGTGCTGCTAGTACAAGGCAGCGGCTTTAACTGGCCAAAAC
CGGATCACTTCCGCATTGTGACTCTGCCTCATGTGGAAGATCTGGAAATCGCCATCAGTCGCTTTGAACGCTTTATCACG
ACTTACAGCCAATAA

Protein sequence :
MQNIGMSSKLDNVCYDIRGPVLKHAKRMEEEGHKILKLNIGNPAPFGFDAPDEILVDVIRNLPTSQGYCDSKGIYSARKA
VVQYYQKKGIRSLDVEDVYIGNGASELIVMAMQALLNNGDEMLVPAPDYPLWTAAVALSGGKAVHYICDEEADWYPDLDD
IRSKITPKTRGIVLINPNNPTGAVYSRDFLLEIIEIARKHKLMIFADEIYDKVLYDGAVHTSIATLADDVLVVTFNGLSK
AYRVCGFRGGWMFLTGPKQQAQGYIAGLDMLASMRLCANVPMQHAIQTALGGYQSINELILPGGRLLEQRDRAWELINQI
PGISCVKPKGAMYLFPKIDTKMYPIKDDQKMVLDFLVQEKVLLVQGSGFNWPKPDHFRIVTLPHVEDLEIAISRFERFIT
TYSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-127 63
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-127 63
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-127 63
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-127 63