Gene Information

Name : VCD_002150 (VCD_002150)
Accession : YP_002877887.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1260462 - 1261499 bp
Length : 1038 bp
Strand : -
Note : COG0582

DNA sequence : 
ATGTCCGTCCGTAACCTTAAAGATGGCAGCAAAAAACCGTGGCTTTGCGAGTGTTACCCGCAAGGCCGCGAAGGTAAGCG
CGTGCGTAAAAGATTCGCCACCAAAGGTGAGGCCACCGCTTATGAAAACTTCATCATGCGTGAGGTGGATGATAAACCGT
GGATGGGGAGTAAGCCTGATAATAGGCGACTGAGTGAATTGCTTGAAACTTGGTGGCAAGTTCACGGACATACGATCAAA
TCAGGTAAAGTGGTTTACCGAAAAACCGCACTCACAATTAAGGAACTGGGCGACCCTATCGCCTCTACGTTTACTTCAAA
GCAGTATCTTGCTTTTAGAGCGAGTCGGGTTAGCCATTTCAATAAAGAAAACAAGTCACTTTCTCCCACTTATCAAAACT
TCCAGCTCAATTTGCTAAGCGGCATGTTCAGCCGATTGATTAAGTATAAGCAGTGGAACTTGCCAAACCCTCTTGATGAC
ATTGAGCCAATAAAAGTTAACCAACGTGCTTTGGCATATCTCGATAAAGCGGATATTCAACCTTTCCTACAGCGCTTGGG
TGGTTTTGAAAGCGATGGGCGTTCTGTTTCTATTCCTGAAATTGTTCTGATTGCAAAAATTTGCCTTGCGACAGGGGCGC
GGATTAGTGAGGCGCTTTCGCTTGAACGTTCTCAGATTTCTGAGTTTAAGCTGACGTTTGTTGAAACGAAGGGCAAACGG
ATTCGCTCTGTGCCTATCTCTGAGAATCTTTACAAAGAGATCATGCTGGCCTCTTCTAGCAGCACTAAGATTTTCTCAAC
CACCTACGGTTCTGCGCATCGTTACATTAAAAAGGCTCTGCCCGATTATGTACCGGAAGGTCAAGCCACCCACGTTTTAC
GGCATACCTTTGCCACTCACTTTATGATGAACCGTGGCGACATCCTGATTTTGCAACGAATACTCGGCCATCAGAAGATT
GAACAAACGATGGCTTATGCGCATTTCTCACCCGATCACCTGATTCAAGCCGTTCAACTAAACCCACTCGAAAACTAA

Protein sequence : 
MSVRNLKDGSKKPWLCECYPQGREGKRVRKRFATKGEATAYENFIMREVDDKPWMGSKPDNRRLSELLETWWQVHGHTIK
SGKVVYRKTALTIKELGDPIASTFTSKQYLAFRASRVSHFNKENKSLSPTYQNFQLNLLSGMFSRLIKYKQWNLPNPLDD
IEPIKVNQRALAYLDKADIQPFLQRLGGFESDGRSVSIPEIVLIAKICLATGARISEALSLERSQISEFKLTFVETKGKR
IRSVPISENLYKEIMLASSSSTKIFSTTYGSAHRYIKKALPDYVPEGQATHVLRHTFATHFMMNRGDILILQRILGHQKI
EQTMAYAHFSPDHLIQAVQLNPLEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4645 NP_458725.1 phage integrase Not tested SPI-7 Protein 6e-69 46
t4338 NP_807932.1 phage integrase Not tested SPI-7 Protein 6e-69 46