Gene Information

Name : VCD_001997 (VCD_001997)
Accession : YP_002877736.1
Strain :
Genome accession: NC_012668
Putative virulence/resistance : Unknown
Product : nucleoside permease NupC
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 1084958 - 1086214 bp
Length : 1257 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCTGTTTATGAGCCTCATCGGCATGGCAGTTCTGCTAGGAATCGCAGTTCTACTGTCAAGTAACCGTAAAGCTAT
CAATCTAAGAACTGTGGGTGGCGCTTTTGCTATCCAATTTTCACTGGGTGCATTTATTCTGTATGTGCCTTGGGGCCAAG
AGCTACTTCGTGGCTTTTCGGATGCCGTATCGAATGTTATTAACTACGGTAACGATGGTACTTCATTCCTCTTCGGTGGA
CTGGTATCAGGCAAAATGTTTGAAGTGTTTGGCGGCGGCGGTTTCATTTTCGCATTCCGCGTACTACCAACACTGATCTT
CTTCTCAGCACTGATTTCTGTACTGTACTACTTGGGTGTTATGCAATGGGTTATCCGCATTCTTGGCGGTGGTCTGCAAA
AAGCACTGGGTACATCACGCGCGGAATCTATGTCTGCGGCTGCAAACATTTTCGTGGGTCAAACTGAAGCACCATTAGTT
GTTCGTCCATTCGTTCCAAAAATGACTCAATCTGAGCTGTTTGCGGTAATGTGTGGTGGCTTGGCTTCTATCGCAGGTGG
TGTACTTGCGGGTTACGCTTCAATGGGCGTTAAGATCGAATACTTGGTAGCGGCGTCATTCATGGCGGCACCGGGTGGTC
TGCTGTTCGCAAAACTGATGATGCCTGAAACTGAAAAACCACAAGACAATGAAGACATTACTCTTGATGGTGGTGACGAC
AAACCGGCTAACGTTATCGATGCGGCTGCTGGCGGTGCTTCTGCTGGTCTGCAACTTGCTCTGAACGTTGGTGCAATGTT
GATTGCCTTTATCGGTTTGATTGCTCTGATCAACGGTATGTTGGGTGGCATCGGTGGTTGGTTCGGTATGCCTGAACTGA
AACTGGAAATGCTACTGGGCTGGTTGTTTGCGCCTCTGGCTTTCCTGATCGGTGTTCCTTGGAACGAAGCAACTGTTGCG
GGTGAGTTCATCGGTCTAAAAACCGTTGCTAACGAATTCGTTGCTTACTCTCAGTTTGCGCCTTACCTGACTGAAGCGGC
ACCAGTGGTTCTGTCTGAGAAAACCAAAGCGATCATCTCTTTCGCTCTGTGTGGTTTTGCGAACCTTTCTTCTATCGCAA
TTCTGCTTGGTGGTTTGGGTAGCTTGGCACCTAAGCGTCGTGGCGACATCGCTCGTATGGGGGTCAAAGCGGTTATCGCA
GGTACTCTATCTAACCTGATGGCAGCGACCATCGCTGGCTTCTTCCTCTCTTTCTAA

Protein sequence :
MSLFMSLIGMAVLLGIAVLLSSNRKAINLRTVGGAFAIQFSLGAFILYVPWGQELLRGFSDAVSNVINYGNDGTSFLFGG
LVSGKMFEVFGGGGFIFAFRVLPTLIFFSALISVLYYLGVMQWVIRILGGGLQKALGTSRAESMSAAANIFVGQTEAPLV
VRPFVPKMTQSELFAVMCGGLASIAGGVLAGYASMGVKIEYLVAASFMAAPGGLLFAKLMMPETEKPQDNEDITLDGGDD
KPANVIDAAAGGASAGLQLALNVGAMLIAFIGLIALINGMLGGIGGWFGMPELKLEMLLGWLFAPLAFLIGVPWNEATVA
GEFIGLKTVANEFVAYSQFAPYLTEAAPVVLSEKTKAIISFALCGFANLSSIAILLGGLGSLAPKRRGDIARMGVKAVIA
GTLSNLMAATIAGFFLSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 6e-60 47