Gene Information

Name : VCD_000980 (VCD_000980)
Accession : YP_002876734.1
Strain :
Genome accession: NC_012667
Putative virulence/resistance : Resistance
Product : acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 1045782 - 1046411 bp
Length : 630 bp
Strand : -
Note : -

DNA sequence : 
ATGAACTTCTTTACGTCTCCATTTTCTGGGATTCCCTTAGATCAGCAAGTAACAAATCCGAACATTATTGTGGGAAAACA
CAGTTATTATTCTGGTTATTATCACGGGCACAGTTTCGATGATTGTGTGCGATATTTACATCCAGAAAGAGATGACGTTG
ATAAGTTAGTCATAGGGAGTTTTTGTTCTATAGGCTCTGGTGCTGTATTTATGATGGCCGGTAATCAAGGGCATCGCAGT
GATTGGATAAGTACATTCCCATTTTTCTATCAGGATAATGATAATTTTGCAGATGCACGCGATGGTTTTACGCGTTCAGG
AGACACAATTATTGGTCATGATGTGTGGATTGGCACTGAGGCTATGATAATGCCTGGGGTTAAAATTGGACATGGAGCGA
TAATCGCCAGTCGTTCAGTAGTGACTAAGGATGTTGCACCTTATGAAGTGGTCGGTTCAAATCCTGCTAAACATATCAAG
TTTAGATTTTCTGATGTGGAAATAGCGATGTTACTTGAAATGGCATGGTGGAATTGGCCAGAATCGTGGTTGAAAGAGAG
TATGCAGTCTCTGTGTTCATCAGACATTGAAGGGCTTTATCTCAATTGGCAGTCAAAAGCACGCACATAA

Protein sequence : 
MNFFTSPFSGIPLDQQVTNPNIIVGKHSYYSGYYHGHSFDDCVRYLHPERDDVDKLVIGSFCSIGSGAVFMMAGNQGHRS
DWISTFPFFYQDNDNFADARDGFTRSGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTKDVAPYEVVGSNPAKHIK
FRFSDVEIAMLLEMAWWNWPESWLKESMQSLCSSDIEGLYLNWQSKART

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 5e-59 68
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 5e-59 68
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 9e-59 67

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCD_000980 YP_002876734.1 acetyltransferase AF322577.2.gene4.p01 Protein 3e-59 68
VCD_000980 YP_002876734.1 acetyltransferase AY740681.1.gene5.p01 Protein 3e-59 68
VCD_000980 YP_002876734.1 acetyltransferase AY123251.gene2.p01 Protein 3e-59 67
VCD_000980 YP_002876734.1 acetyltransferase JF268688.1.gene6.p01 Protein 3e-56 66
VCD_000980 YP_002876734.1 acetyltransferase NC_002516.2.878374.p Protein 3e-58 65
VCD_000980 YP_002876734.1 acetyltransferase CP001581.1.gene990.p Protein 6e-36 48
VCD_000980 YP_002876734.1 acetyltransferase NC_010410.6000796.p0 Protein 8e-29 47
VCD_000980 YP_002876734.1 acetyltransferase NC_011595.7057349.p0 Protein 8e-29 47
VCD_000980 YP_002876734.1 acetyltransferase AM180355.1.gene2499. Protein 4e-30 46